Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00378 ATGAATGTCACTAAACAGAACAGCAAAGTGAATGAGTTCAATAAAGAAAAGGGAGACAAGGGAGTTGCTAGTAAAGGAAGCGAGTCTCAGCCCACACAGATACTCATAAGGTTTCCAAACGGTGAAAGAAGAGAGCATACTTTCCTTTACACAAACAAAATCCAGTCCATTTTCTCATACATTGATTCATTAGGTTTGCCAGGGATTGGAAACTGCTGA 219 0.3973 MNVTKQNSKVNEFNKEKGDKGVASKGSESQPTQILIRFPNGERREHTFLYTNKIQSIFSYIDSLGLPGIGNC 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00378 72 ProSiteProfiles UBX domain profile. 27 72 IPR001012 GO:0005515
Gma05g00378 72 PANTHER UBIQUITIN-ASSOCIATED (UBA) PROTEIN-RELATED 5 71 - -
Gma05g00378 72 PANTHER FAS-ASSOCIATED PROTEIN 5 71 - -
Gma05g00378 72 Gene3D - 26 70 - -
Gma05g00378 72 Pfam UBX domain 28 64 IPR001012 GO:0005515
Gma05g00378 72 MobiDBLite consensus disorder prediction 1 33 - -
Gma05g00378 72 SUPERFAMILY Ubiquitin-like 28 67 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00378 Gma-Chr5 3527306 3527618 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00378 K18726 - gmx:100775212 132.109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00820 17 6905507 6907436 Gma05g00378 05 3527306 3527618 GST