Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00356 ATGATGGCTCTCAACATCTCTTCTCCAGCTGAAGTCAAGTCCATTTTTTTCGCTGATTCCTTCAAGTCTAACTGCCTCACAGCAAAATTCTCAGGTGGGTTTGCTTTTAAGAGAAAAGAGCGTAGAGCAGCATCTGGAGGACGGGTTTATTGCTCAGTGCAGGCAACACCACCACCACCAGCCTGGCCGGGACGAGCGGTTCCGGAACAAGGTCGCAAGACTTGGGATGGACCAAAACCCATTTCAATTGTGGGGAGTACTGGTTCAATTGGAACTCAGACACTAGATATTGTGGCAGAGAATCCAGATAAGTTTAAAGTTGTGGCACTTGCAGCTGGTTCAAATGTTACTCTTCTTGCAGACCAGGTAAAAAGATTTAAGCCTCAACTTGTTGCTGTTAGAAATGAGTCCCTAATTGCTGAACTTGAAGAGGCCTTGCATGATGTTGAAGAAAAACCTGAGATCATCCCTGGAGAGCAGGGAATCATTGAGGTTGCTCGTCACCCAGATGCAGTTAGTGTAGTCACAGGAATAGTAGGCTGTGCAGGACTGAAGCCAACAGTTGCAGCGATAGAAGCAGGGAAAGACATAGCTTTGGCCAACAAAGAGACATTGATTGCTGGAGGTCCTTTTGTTCTTCCTCTTGCTCAGAAGCATAATGTAAAAATACTTCCAGCTGATTCAGAACATTCTGCCATCTTTCAGTGTATCCAGGGGTTGCCAGAGGGTGCACTTAGGAGAGTTATTTTAACTGCATCTGGAGGTGCTTTCAGGGATTGGCCAGTTGATAAACTGAAAGATGTTAAAGTTGCTGATGCATTAAAACATCCTAACTGGAATATGGGGAAAAAGATAACTGTGGACTCTGCTACCCTTTTTAATAAGGGTCTAGAAGTAATTGAAGCACATTACTTGTTTGGAGCTGACTACGATCATATTGAGATTGTCATTCATCCACAATCAATCATACATTCAATGATTGAAACACAGGATTCATCTGTTCTTGCACAATTGGGGTGGCCTGATATGCGTTTGCCAATCCTCTATACATTATCATGGCCTGACAGGATTTATTGTTCTGAAGTCACTTGGCCACGCCTTGATCTTTGCAAGCTTGGTTCACTTACATTTAAAACTCCAGATAATGTAAAGTATCCATCCATGAATCTTGCATTTTCTGCTGGCCGTGCTGGAGGCACAATGACAGGAGTTCTTAGTGCAGCAAATGAAAAAGCTGTAGAGATGTTTATTGATGAAAAGATTAGCTATTTGGATATATTCAAAGTTGTGGAGCTAACATGTGAGAAGCATCAAAATGAATTGGTATCCTCTCCTTCCCTTGAGGAAATTATTCACTATGACCTGTGGGCGCGAAAATATGCTGCTAGTCTGCAAGACTCTTCCAGCTTCACTCCTATTCTTGCATGA 1428 0.4293 MMALNISSPAEVKSIFFADSFKSNCLTAKFSGGFAFKRKERRAASGGRVYCSVQATPPPPAWPGRAVPEQGRKTWDGPKPISIVGSTGSIGTQTLDIVAENPDKFKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELEEALHDVEEKPEIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAQKHNVKILPADSEHSAIFQCIQGLPEGALRRVILTASGGAFRDWPVDKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGADYDHIEIVIHPQSIIHSMIETQDSSVLAQLGWPDMRLPILYTLSWPDRIYCSEVTWPRLDLCKLGSLTFKTPDNVKYPSMNLAFSAGRAGGTMTGVLSAANEKAVEMFIDEKISYLDIFKVVELTCEKHQNELVSSPSLEEIIHYDLWARKYAASLQDSSSFTPILA 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00356 475 Gene3D - 72 227 - -
Gma05g00356 475 Pfam 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain 223 306 IPR013644 GO:0005515
Gma05g00356 475 Gene3D - 383 467 - -
Gma05g00356 475 SUPERFAMILY 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 371 465 IPR036169 -
Gma05g00356 475 Pfam 1-deoxy-D-xylulose 5-phosphate reductoisomerase 81 209 IPR013512 GO:0070402
Gma05g00356 475 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 204 341 - -
Gma05g00356 475 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 78 227 IPR036291 -
Gma05g00356 475 Coils Coil 132 152 - -
Gma05g00356 475 Pfam DXP reductoisomerase C-terminal domain 338 459 IPR026877 -
Gma05g00356 475 TIGRFAM Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 79 461 IPR003821 GO:0008299|GO:0030604|GO:0046872
Gma05g00356 475 Hamap 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 81 464 IPR003821 GO:0008299|GO:0030604|GO:0046872
Gma05g00356 475 PANTHER 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE 2 474 IPR003821 GO:0008299|GO:0030604|GO:0046872
Gma05g00356 475 PIRSF Dxp_reductoisomrs 78 470 IPR003821 GO:0008299|GO:0030604|GO:0046872
Gma05g00356 475 PANTHER 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE-RELATED 2 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00356 Gma-Chr5 3333300 3338162 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00356 K00099 - gmx:100790607 929.858
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00842 17 7126148 7132205 Gma05g00356 05 3333300 3338162 GST