Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00354 ATGCCAGAGATCGTTACAAATGGAGTTAATGATGAAAGAAGAGTAAATGAAATGAATGAGATTGGGAACATTTCACCCTTGAGGGAAACCCCAAGTCCAATCAAGAACCTGAGGAGTTCCTTGAGTCCACAAAGAAGACAAAGTGTTGGTCCAAATTTTCCTGTTAATAGGGTGATTGACACTTCCTCAATTGATAGGCTTCATGGAAATGTTTGTGACAAGCAAAGTTCTAGTCAATCACCCTCAAGACAAAGTTTTGGATCCGATGGCAATGAGTCAAAAACCGATTCAGAATTGCACAATCTAGTGAAAGAGGGAGTAAAGAAAAAGACAAAAGGGGATTCTAGAAGTGAAGCATCTTCCAAAATGGGCAGTTTGTCAAATGATAAGAAGTTGGATAGGATTCGGCCAGCAACTGCAAGTGGTGTTGTTTCACAAAAACTAAAGAAAGCATCACAATCACAGTTGGCCCTTGAATTTCCATCAAGATCAAGACCAAAGGGAAAAAGCCCTCCTCCAAAACCTCCTGTTGATAGGAAGAATGATAATAACCCTTTGGGGAAACAAAATACAAGAGTTATCCGCGTGAAAAAAACTGTTGGTGGAAGATCACTGTCACAAAGTCACATTGAGAATTTCACTGGATCAGCATTGGATAGGCCTGATCTGGGACTAGCTTTACTAAACCAAGCAAGGAACATGATTTCATCGGGAGATAATCCGATGAAAGCTCTTGAATTATCTCTTCAAGCAATGAAATTGTTTGAGAGAGCTGCTGCTTATGGGAAACCAAGTTTGGATTTGGCCATGTGTTTACATGTTACTGCAGCAATATATTGCAGTTTGGGACATTTCAGTGAAGCGATTCCAATTATAGAGCGCTCAATTGAGATTCCCACTATTGAGGAAGACCACCAACACGCCATTGCTAAATTTGCCGGTCACATGCATCTAGGAGACATATATGCCATGTTAGGCCATCTTGAGAAATCAATTAAGTGCTACACTGAAGGGTTGAAAGTACAAAGGAAGGCTTTGGGAGAAACAGATCCAAAAGTTGGTGAAACTTGCCGGTATGTGGCTGAGGCTAACTTTCAAGCATTGCAATTTGATGAAGCAGAGAGGCTGTGCCAAATTGCCCTTGACATTCATAGAGCAAATGGTTCACCCTCATCTCTTGAAGAGGCAGCTGATAGGAGGCTAATGGGACTTATATGTGAAGCAAATGGAAAACATGAAGCAGCCTTGGAGCATCTTGTTTTGGCCAGCATGGCAATGGTAGCAAATGGCCAACATGTGGAAGTAGCATCTGTTGATTGCAACATTGGAGACACATACTTATCCTTGGCTAGATATGATGAGGCCATCTTTGCATATCAGAGAGCATTGGCAGTTTACAGGACTCACAAAGGTGAGAATCATCCTTCTGTGGGATCAGTCTTTGTACGCCTTGCTGACTTGTATTGCAGGACATGGAAGATAAGGGAATCAAAATCATATTGTGAGAGTGCACTTAAAATCTATGAGAATCCCATGCCTGGGGTCCCTCCAGAGGAGGTTGCTAGTGGTTTTATGAATGTCTCAGCCATTTATGAGTCAATGAATGAGCTAGAACAGGCACTTAAGTTACTTCACAAGGCACTAGAGATACTTAATGAAGCCTCTGGTCAGCAAAACACAATAGCTGGTATTGAAGCTCAGATGGGAGTCATGTACTACGTGTTGGAGAACTACACTGAATCTTACAATACTTTCAAGAATGCTGTGTCGAAGCTTCGTGCTACTGGGGAGAAGAAATCTGCATTCTTTGGTACTGTTCTTAATCAAATGGGACTTGCTTGTGTGCAGCTTCATGCCTTAGATGAGGCTGTCGAATTATTTGAAGAAGCGAGGGTCATTCTGGAACAAGAGAATGGACCTTATCACCCTGAAACACTTGGAGTATATGGCAATCTTGCTGGCACGTATGATGCAATTGGAAGGTTGGATGAAGCAATTGAAATTCTTGAAAACATTGTGGTAATGAGGGAGGAAAAGCTTGGGACAGCAAATCCTGATGTTGTTGATGAGAAGAGAAGGTTGGACGAGTTGTTGAAGGAAACAGGCAGAGTTCGGAACAGAAAAACCAAGTCACTCGAGATCCTTTTTGACGCCAATCCTCGTACTATAAAAAACCTTGTCGTTGAGGCCTGA 2193 0.42 MPEIVTNGVNDERRVNEMNEIGNISPLRETPSPIKNLRSSLSPQRRQSVGPNFPVNRVIDTSSIDRLHGNVCDKQSSSQSPSRQSFGSDGNESKTDSELHNLVKEGVKKKTKGDSRSEASSKMGSLSNDKKLDRIRPATASGVVSQKLKKASQSQLALEFPSRSRPKGKSPPPKPPVDRKNDNNPLGKQNTRVIRVKKTVGGRSLSQSHIENFTGSALDRPDLGLALLNQARNMISSGDNPMKALELSLQAMKLFERAAAYGKPSLDLAMCLHVTAAIYCSLGHFSEAIPIIERSIEIPTIEEDHQHAIAKFAGHMHLGDIYAMLGHLEKSIKCYTEGLKVQRKALGETDPKVGETCRYVAEANFQALQFDEAERLCQIALDIHRANGSPSSLEEAADRRLMGLICEANGKHEAALEHLVLASMAMVANGQHVEVASVDCNIGDTYLSLARYDEAIFAYQRALAVYRTHKGENHPSVGSVFVRLADLYCRTWKIRESKSYCESALKIYENPMPGVPPEEVASGFMNVSAIYESMNELEQALKLLHKALEILNEASGQQNTIAGIEAQMGVMYYVLENYTESYNTFKNAVSKLRATGEKKSAFFGTVLNQMGLACVQLHALDEAVELFEEARVILEQENGPYHPETLGVYGNLAGTYDAIGRLDEAIEILENIVVMREEKLGTANPDVVDEKRRLDELLKETGRVRNRKTKSLEILFDANPRTIKNLVVEA 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00354 730 ProSiteProfiles TPR repeat profile. 436 469 IPR019734 GO:0005515
Gma05g00354 730 ProSiteProfiles TPR repeat profile. 521 554 IPR019734 GO:0005515
Gma05g00354 730 SUPERFAMILY TPR-like 564 703 IPR011990 GO:0005515
Gma05g00354 730 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 1 719 - -
Gma05g00354 730 SUPERFAMILY TPR-like 314 419 IPR011990 GO:0005515
Gma05g00354 730 SMART tpr_5 269 302 IPR019734 GO:0005515
Gma05g00354 730 SMART tpr_5 396 429 IPR019734 GO:0005515
Gma05g00354 730 SMART tpr_5 562 595 IPR019734 GO:0005515
Gma05g00354 730 SMART tpr_5 478 511 IPR019734 GO:0005515
Gma05g00354 730 SMART tpr_5 521 554 IPR019734 GO:0005515
Gma05g00354 730 SMART tpr_5 436 469 IPR019734 GO:0005515
Gma05g00354 730 SMART tpr_5 604 637 IPR019734 GO:0005515
Gma05g00354 730 SMART tpr_5 312 345 IPR019734 GO:0005515
Gma05g00354 730 SMART tpr_5 354 387 IPR019734 GO:0005515
Gma05g00354 730 SMART tpr_5 646 679 IPR019734 GO:0005515
Gma05g00354 730 MobiDBLite consensus disorder prediction 93 117 - -
Gma05g00354 730 Coils Coil 617 637 - -
Gma05g00354 730 MobiDBLite consensus disorder prediction 68 92 - -
Gma05g00354 730 MobiDBLite consensus disorder prediction 145 160 - -
Gma05g00354 730 Gene3D Tetratricopeptide repeat domain 423 604 IPR011990 GO:0005515
Gma05g00354 730 Coils Coil 534 554 - -
Gma05g00354 730 MobiDBLite consensus disorder prediction 1 191 - -
Gma05g00354 730 MobiDBLite consensus disorder prediction 23 59 - -
Gma05g00354 730 SUPERFAMILY TPR-like 221 342 IPR011990 GO:0005515
Gma05g00354 730 PANTHER KINESIN LIGHT CHAIN 1 719 - -
Gma05g00354 730 Gene3D Tetratricopeptide repeat domain 206 422 IPR011990 GO:0005515
Gma05g00354 730 Pfam MalT-like TPR region 272 434 IPR041617 -
Gma05g00354 730 Pfam Tetratricopeptide repeat 435 510 - -
Gma05g00354 730 Pfam Tetratricopeptide repeat 605 670 - -
Gma05g00354 730 Gene3D Tetratricopeptide repeat domain 605 710 IPR011990 GO:0005515
Gma05g00354 730 SUPERFAMILY TPR-like 431 551 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00354 Gma-Chr5 3315206 3318144 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00354 - - gmx:100813461 1390.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00354 05 3315206 3318144 Gma17g00844 17 7148596 7152147 ECH
Gma05g00354 05 3315206 3318144 Gma05g00354 05 3315206 3318144 ECH
Gma17g00844 17 7148596 7152147 Gma05g00354 05 3315206 3318144 GST
Gma05g00354 05 3315206 3318144 Gma06g01631 06 16088437 16092692 PCT
Gma06g01631 06 16088437 16092692 Gma05g00354 05 3315206 3318144 PCT