Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00270 ATGGGATCTGGGGCCGGCAATTTCCTCAAGGTGCTTCTCAAAAACTTCGATGTGCTTGCTGGGCCTGTCATTAGTCTTGTTTATCCTCTATATGCTTCAATTAGGGCAATTGAGAGCAAGTCTCCTATTGATGATCAGCAGTGGCTCACTTACTGGGTTCTCTACTCCTTGATCACCCTCTTTGAACTTACTTTTGCTAAAGTCCTTGAGTGGATTCCAATATGGCCCTATGCAAAGCTGATTGCAACCTGCTGGTTGGTCCTTCCTTACTTTAGCGGTGCCGCTTATGTTTATGAGCATTATGTGAGACCTTTCTATGTCAATCCTCAGACCATTAACATCTGGTACGTTCCAAGGAAAAAGGATGCCTTGGGTAAGCGAGATGATATTCTGACTGCTGCAGAGAAGTACATCCAAGAGAATGGAACAGAAGCATTTGAGAATATCATCAATAGGGCTGACAAATCAAGAAGGGGTGACGGGGATGCATGTACATCTTACCCTGTTGCTGATATTTTGTTTTTCCTTCTCCATGGAACAGTGATATTTTGGGATGCTACTACCATCATACATTGCAATGACCTAGGCTAA 591 0.4349 MGSGAGNFLKVLLKNFDVLAGPVISLVYPLYASIRAIESKSPIDDQQWLTYWVLYSLITLFELTFAKVLEWIPIWPYAKLIATCWLVLPYFSGAAYVYEHYVRPFYVNPQTINIWYVPRKKDALGKRDDILTAAEKYIQENGTEAFENIINRADKSRRGDGDACTSYPVADILFFLLHGTVIFWDATTIIHCNDLG 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00270 196 PANTHER HVA22-LIKE PROTEIN 4 161 - -
Gma05g00270 196 PANTHER HVA22-LIKE PROTEINS 4 161 IPR004345 -
Gma05g00270 196 Pfam TB2/DP1, HVA22 family 29 105 IPR004345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00270 Gma-Chr5 2451006 2453269 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00270 K17279 - gmx:100306331 334.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00270 05 2451006 2453269 Gma17g00931 17 7958799 7960279 ECH
Gma05g00270 05 2451006 2453269 Gma05g00270 05 2451006 2453269 ECH
Gma17g00931 17 7958799 7960279 Gma05g00270 05 2451006 2453269 GST
Gma01g00416 01 5225063 5228051 Gma05g00270 05 2451006 2453269 PCT
Gma02g00968 02 10308880 10311594 Gma05g00270 05 2451006 2453269 PCT