Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00416 ATGGGTGCTTCTGGCAACAATTTTCTCCAAGTGGTCGCCAAGAACTTCGATGTTCTTGCTCTGCCCTTGGTCACCCTTGTTTACCCTTTATATGCTTCAATCAAGGCCATAGAGACCAGGTCTAGTACTGATGATCAGCAATGGCTGACTTATTGGGTTCTCTATTCATTGATCACACTCTTCGAGCTCACATTTGCCAAAGTTCTTGAAGTGCTTGCCATATGGCCCTATGCCAAGTTGATACTCAGTTGCTGGTTGGTTCTTCCAAACTTTAATGGGGCAGCACATGTTTATAGGCACTATGTTAGACCATTCTATATGAATCCAcaaatgcctcaaatgcctcaaatgcctcaaatCCCAGGAACTTCTCAAATGTGGTATGTTCCTAGAAAGAACATCTTTAGTAAGCAGGATGATGTCCTTACTGCTGCTGAGAGATACATGGAAGAGCATGGAACAGAAGCATTTGAAAGACTCATAACCAAGGCTGACAGAGAAGCTAGAGCAAGGAGGAATGGAAATTATATGATCTTTGATGATGATTATATAGATTAA 558 0.3943 MGASGNNFLQVVAKNFDVLALPLVTLVYPLYASIKAIETRSSTDDQQWLTYWVLYSLITLFELTFAKVLEVLAIWPYAKLILSCWLVLPNFNGAAHVYRHYVRPFYMNPQMPQMPQMPQIPGTSQMWYVPRKNIFSKQDDVLTAAERYMEEHGTEAFERLITKADREARARRNGNYMIFDDDYID 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00416 185 Pfam TB2/DP1, HVA22 family 29 105 IPR004345 -
Gma01g00416 185 PANTHER HVA22-LIKE PROTEINS 2 184 IPR004345 -
Gma01g00416 185 PANTHER HVA22-LIKE PROTEIN 2 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00416 Gma-Chr1 5225063 5228051 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00416 K17279 - gmx:100306464 357.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00416 01 5225063 5228051 Gma01g00416 01 5225063 5228051 ECH
Gma01g00416 01 5225063 5228051 Gma02g00968 02 10308880 10311594 GST
Gma01g00416 01 5225063 5228051 Gma17g00931 17 7958799 7960279 PCT
Gma01g00416 01 5225063 5228051 Gma05g00270 05 2451006 2453269 PCT