Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02412 ATGGTCTCTGCAATCACCAATTCTGGGAGACCCCACGAGGCTCTTACCCTCTACAACCACATGCTGGAATCCAAAACTGTGCAACCTAATCAGTTTTTGTACTCTGCGGTTCTCAAGGCATGTGGTCTCATGGGTGATGTTGAATTGGGCAAGTTGGCTCACCAACATGTATCTCAAGCTAGGTTAGAGTTTGACACAGTTCTGATGAATGCCCTTTTGGACATGTACGTCAAATGTGGGAGCTTGAGGGATGCCAAACGAGTTTTCTGTGTAAAAATTCCACTTCATGGAACACCCTCATTCTTGGACCATGCTAAACAGGGTCTGATGAGGGATGCGTTGAATCTGTTCGATCAAATGCCAGAACCAGACCTTGTTTCTTGGAATAGCATCATTGCTGGTCTTGCAGATAATGCTAGCCCCCATGCATTGCAATTTTTTTCTATGATGCATGGGAAGGGCCTTAAACATGATGCATTCACATTCCCATGTGCCCTCAAAACATGCAGTCTTCTTGGAGAGTTAACCATGGGGAGACAGATTCATTGTTGTATTATAAAGTCAGGGTTTGAGTGTAGCTGCTATTGTATATCAGCATTGATTGACATTATGGAATTCTATGCTTTCTGGGTATGTTGCCAATGGAGATTGGTGGAAGGCACTCAGTATGATTTGTATACCTTTTGTATTGCATTAAAGGTCTGCATCTATTTTGGTAACTTGAGGTTGGTATTTCAAGTGCATGGATTGGTCATCACCGGTGGCTATGAGTTGGATTATGTTGTTGGAAGCATTCCTCCTAAATAA 807 0.4287 MVSAITNSGRPHEALTLYNHMLESKTVQPNQFLYSAVLKACGLMGDVELGKLAHQHVSQARLEFDTVLMNALLDMYVKCGSLRDAKRVFCVKIPLHGTPSFLDHAKQGLMRDALNLFDQMPEPDLVSWNSIIAGLADNASPHALQFFSMMHGKGLKHDAFTFPCALKTCSLLGELTMGRQIHCCIIKSGFECSCYCISALIDIMEFYAFWVCCQWRLVEGTQYDLYTFCIALKVCIYFGNLRLVFQVHGLVITGGYELDYVVGSIPPK 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02412 268 Gene3D Tetratricopeptide repeat domain 95 265 IPR011990 GO:0005515
Gma04g02412 268 Gene3D Tetratricopeptide repeat domain 1 94 IPR011990 GO:0005515
Gma04g02412 268 PANTHER - 105 203 - -
Gma04g02412 268 PANTHER - 1 89 - -
Gma04g02412 268 Pfam PPR repeat 1 24 IPR002885 -
Gma04g02412 268 Pfam PPR repeat 68 90 IPR002885 -
Gma04g02412 268 Pfam PPR repeat 105 122 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g02412 Gma-Chr4 54488858 54489745 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g02412 7 259 Glycoside Hydrolase AT3G49170 21.875 1.76e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g02412 - - gmx:102659476 418.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02412 04 54488858 54489745 Gma06g00984 06 9181284 9185221 GST