Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02323 ATGTACCCATTATTGAAGCAAGCGCAAGGTCCTTATTCTTCTCTTTCATATTGCTCTCTTCTCCTAAACCACTGTTTATCTAAAAAATCGCTTAACTTTGTCAAAATCGTGCATGCCCACTTCCTCAAATTGGGTCTTAACACCTACACATACTTGGGCAATCGCTGTCTCGACCTTTACTCTGAGTTCGGCCACCTTAACGATGCACCGAAGGTGTTTGATGATATTTCCCATAAGAATTCCACGTCTTGGAACATTTGCTTGAAATGGTTGCTCAAAAGTGGCCAGTTTGGCAAGGCCTGCCACTTGTTTGATGCAATGCCTGTTAGAGATGTCGTTACTTGGAACTCCATGATTTCGGGTTATGCTTCTTGTGGGTATTTTAGTCATGCCTTGGAGCTTTTTGTTGAAATGCAAGGCACTGGTGTAAGGCCAAGTGGGTTCACTTTCTCCATTTTGATGTCACTCGTGTCAAGTCCCTCTCATGCTAAGCAGATTCACTCTAGGATGATCAGAAGTGGGGTGGATTTGGATAATGTAGTGCTTGGGAATTCGTTGATAACTATGTATGGGAGGCTTGGTCTTGTTGAATATTCTTTTGGTGTGATTATGACTATGAAGCAGTTTGATGTCATATCTTGGAACTCTTTGATCTGGGCTTGTCATAGAGCTGGACACCATGAGTTGGCTTTGGAGCAGTTCTATTGGATGAGAGGTGCTGAGTTTTTACCTGATCAATTTACGTGTTCAGTGTTGATGAGTGTCTGTTCTAACTTGCGAGACTTGGACAAGGATTGGAGGATTCTGTGCGGCTCTTTAAGGAACAAGATCAATGGGATTCAGCTCTATGCAATTCCATGA 861 0.4274 MYPLLKQAQGPYSSLSYCSLLLNHCLSKKSLNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSEFGHLNDAPKVFDDISHKNSTSWNICLKWLLKSGQFGKACHLFDAMPVRDVVTWNSMISGYASCGYFSHALELFVEMQGTGVRPSGFTFSILMSLVSSPSHAKQIHSRMIRSGVDLDNVVLGNSLITMYGRLGLVEYSFGVIMTMKQFDVISWNSLIWACHRAGHHELALEQFYWMRGAEFLPDQFTCSVLMSVCSNLRDLDKDWRILCGSLRNKINGIQLYAIP 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02323 286 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 210 244 IPR002885 -
Gma04g02323 286 Gene3D Tetratricopeptide repeat domain 159 280 IPR011990 GO:0005515
Gma04g02323 286 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 111 145 IPR002885 -
Gma04g02323 286 PANTHER OS03G0435200 PROTEIN 1 276 - -
Gma04g02323 286 PANTHER OS07G0578800 PROTEIN-RELATED 1 276 IPR045215 GO:0003723|GO:0009451
Gma04g02323 286 TIGRFAM PPR: pentatricopeptide repeat domain 113 146 IPR002885 -
Gma04g02323 286 TIGRFAM PPR: pentatricopeptide repeat domain 83 112 IPR002885 -
Gma04g02323 286 Pfam PPR repeat family 210 256 IPR002885 -
Gma04g02323 286 Pfam PPR repeat family 110 155 IPR002885 -
Gma04g02323 286 Gene3D Tetratricopeptide repeat domain 26 158 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g02323 Gma-Chr4 53684914 53685868 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g02323 103 268 Glycoside Hydrolase AT3G49170 26.316 5.77e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g02323 - - gmx:100819993 543.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02323 04 53684914 53685868 Gma06g01074 06 10055764 10061651 GST