Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02318 ATGGTTGGCAAGGATAGTCTGAGGGCTGAGGACTTGAACTTGTGCTTTGAGAAACTTATGATGGTGGCTGGGAGTGGGAACGGTGAGAAAGGGGTGAACTCGAAGGTTGGGGTGATCACCGAGTGGAAGGACATTCCTGTGGAGCTTTTGATGCAGATTCTGTCCCTTGTGGATGATCAGACGGTGATCACAGCTTCTGGAGTTTGTCGTGGATGGAGAGATGCTATTTACTTTGGACTTGCTCGTTTATCACTCTCATGGTGTAGCAAGAGCATGAATAACTTGGTCCTATCTCTTGTTCCGAAATTCGTAAAACTGCAAACTCTAATCCTCCGTCAAGACAAGCCTCAACTAGAGGATAATGCTGTCGAGACTATTGCAAAATGCTGTCATGAACTGCAGATTCTGGATCTCAGCAAAAGTTTCAAGCTAACTGATCATTCACTCTATGAACTTGCCCTTGGTTGTCGTGATCTTACAAAACTCAACATCAGTGGTTGTTCAGCATTTAGTGACAATGCTCTGGCTTACCTTGCCAGTTTCTGCAGAAAACTGAAAGTTCTAAATCTTTGTGGGTGTGTTAGAGCTGCATCTGATACTGCATTACAGGCTATTGGACAATACTGCAATCAGCTACAATCTTTGAACCTTGGATGGTGCGATAATGTTGGCGATGTTGGAGTAACTACTTTAGCATACGGGTGTCCTGATCTTAGGATAGTTGATTTGTGTGGCTGTGTCCGTATAACAGATGATAGTGTGATTGCTTTGGCAACTAGATGCCCCCATCTGAGGTCCCTAGGACTGTACTACTGCAAGAACATCACAGATAGGGCAATGTATTCCTTGGCACACAGCAAGGTGAACAACAGGATGTGGGGATCTGTGAAAGGAGGAAATGATGAAGATGGGTTAAGGACTTTGAACATTAGCCAATGCACTGCACTCACCCCATCTGCTGTTCAAGCTGTTTGTGACTCATTCCCTTCCCTTCACACATGCTCAGGGAGGCACTCACTCATCATGAGTGGCTGCCTCAACTTGACTTCAGTGCATTGTGCCTGTGCTGTCCATGCACACCGTGCATTCACCACTTTCCCTCATCCTGCTCATTAA 1116 0.4561 MVGKDSLRAEDLNLCFEKLMMVAGSGNGEKGVNSKVGVITEWKDIPVELLMQILSLVDDQTVITASGVCRGWRDAIYFGLARLSLSWCSKSMNNLVLSLVPKFVKLQTLILRQDKPQLEDNAVETIAKCCHELQILDLSKSFKLTDHSLYELALGCRDLTKLNISGCSAFSDNALAYLASFCRKLKVLNLCGCVRAASDTALQAIGQYCNQLQSLNLGWCDNVGDVGVTTLAYGCPDLRIVDLCGCVRITDDSVIALATRCPHLRSLGLYYCKNITDRAMYSLAHSKVNNRMWGSVKGGNDEDGLRTLNISQCTALTPSAVQAVCDSFPSLHTCSGRHSLIMSGCLNLTSVHCACAVHAHRAFTTFPHPAH 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02318 371 PANTHER UNCHARACTERIZED 1 353 - -
Gma04g02318 371 Gene3D Ribonuclease Inhibitor 82 295 IPR032675 -
Gma04g02318 371 PANTHER F-BOX SKP2A-LIKE PROTEIN 1 353 - -
Gma04g02318 371 SMART LRR_CC_2 261 286 IPR006553 -
Gma04g02318 371 SMART LRR_CC_2 182 208 IPR006553 -
Gma04g02318 371 SMART LRR_CC_2 130 155 IPR006553 -
Gma04g02318 371 SMART LRR_CC_2 103 129 IPR006553 -
Gma04g02318 371 SMART LRR_CC_2 209 234 IPR006553 -
Gma04g02318 371 SMART LRR_CC_2 302 327 IPR006553 -
Gma04g02318 371 SMART LRR_CC_2 77 98 IPR006553 -
Gma04g02318 371 SMART LRR_CC_2 235 260 IPR006553 -
Gma04g02318 371 SMART LRR_CC_2 156 181 IPR006553 -
Gma04g02318 371 Gene3D - 39 81 - -
Gma04g02318 371 Pfam F-box-like 43 76 IPR001810 GO:0005515
Gma04g02318 371 SUPERFAMILY RNI-like 78 285 - -
Gma04g02318 371 Pfam Leucine Rich repeat 261 284 IPR001611 GO:0005515
Gma04g02318 371 Pfam Leucine Rich repeat 209 232 IPR001611 GO:0005515
Gma04g02318 371 SUPERFAMILY F-box domain 38 77 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g02318 Gma-Chr4 53623406 53625845 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g02318 K03875 - gmx:100818928 752.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02318 04 53623406 53625845 Gma04g02318 04 53623406 53625845 ECH
Gma04g02318 04 53623406 53625845 Gma06g01078 06 10110910 10114479 GST
Gma14g01505 14 35531304 35535942 Gma04g02318 04 53623406 53625845 PCT
Gma04g02318 04 53623406 53625845 Gma14g01505 14 35531304 35535942 PCT