Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01990 ATGAACACTCCAATTCATGCCCCTTCATCATCACCATCTTCTTcttcttcctcctacatgcttcgtcctccttcatgcCTCTCTCATCCTTCTCGTAACATCAAGTGTCCTATGTTGTTACCACAGGCAATTTGTACCTCTCAAAAGAAGTACTGGTGCTTCAGAGCTCATGTGGAGGCTTCTTTTAACACTAATCCCTTGAAAAATTACACATCAGTCAGTTGCTCTACATGGTGGTCTGAAGCACAATCCTTAGTTTCTTACAAAACACACAACAAACAGTTGTTCACTGTAGGATCTTTAGCAACTTCAACAGCTCAAGATGTTTCTGATACAACTCTTATTGGTGGTGATAAGATTGGCGTGTTACTGTTAAACCTTGGAGGTCCAGAGACTCTAGAAGATGTGCAGCCTTTTTTGTTTAACCTTTTTGCCGACCCGGATATAATACGTTTGCCAAGGATATTTAGTTTTCTTCAAAAGCCATTGGCTCAATTTGTATCTGTCGCAAGAGCCCCAAAGAGCAAAGAAGGCTATGCTTCAATTGGTGGTGGCTCTCCTCTCAGACGCATGACTGATGAACAGGCCGAGGAGTTGAAAAAATCTCTTTGGGAAAAGAATGTCCCTGCTAAAGTGTATGTTGGCATGCGTTACTGGCATCCTTTCACTGAAGAAGCTATTGAGCAGATTAAAAGGGATGGAATTACAAAGCTTGTTATTCTTCCACTCTATCCACAATTTTCAATATCAACGAGTGGCTCAAGCCTACGTCTACTGGAGAGTATATTCCGAGAGGATGAGTATCTAGTCAACATGCAGCACACAGTAATACCCTCATGGTATAAACGTGAAGGATACATAAAGGCCATGGCAAATTTAATTGAAAAAGAGCTGAAGAGTTTTGACTGCCCCGAGGAGGTCATGATATTCTTTAGTGCACATGGGGTGCCTCTTGCTTATGTGGAAGAGGCTGGTGATCCATACAAGGCTGAGATGGAAGAATGTGTGGATTTGATCATGGAAGAACTTGAGACACGAAAGATAACTAATGCTTGCACCCTTGCTTATCAGAGTAGAGTTGGACCAGTGGAATGGTTAAGACCCTATACAGACGAGACAATAGTTGAACTTGGAAAAAAGGGAGTGAAAAGTCTGCTCGCTGTTCCAATTAGCTTCGTCAGTGAGCATATTGAAACTCTAGAAGAAATTGATGTTGAATACAAAGAGTTGGCTCTAGAATCTGGTATAGAAAAGTGGGGCCGTGTTCCTGCTCTAGGATGCGAACCTACCTTCATTTCTGATTTGGCAGATGCCGTTATTGAGAGTCTCCCATATGTTGGTGCCATGACAGCTTCAGACCTTGAAGCTCAACAATCCCTCGTTCCACTGGGCAGTGTAGAAGAGTTATTGGCAGCATATGATTCACAACGCAGGGAGTTGCCACCACCAGTTATAGTGTGGGAATGGGGTTGGACAAAAAGTGCTGAAACTTGGAATGGAAGAGTAGCTATGCTTGCTGTGCTTCTTCTTTTGTTTTTTGAATTCACTGCAGACAAGGGTTTGCTGCACCAGATGGGAATATGGCCCTTGCTTAGATGA 1599 0.4184 MNTPIHAPSSSPSSSSSSYMLRPPSCLSHPSRNIKCPMLLPQAICTSQKKYWCFRAHVEASFNTNPLKNYTSVSCSTWWSEAQSLVSYKTHNKQLFTVGSLATSTAQDVSDTTLIGGDKIGVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRIFSFLQKPLAQFVSVARAPKSKEGYASIGGGSPLRRMTDEQAEELKKSLWEKNVPAKVYVGMRYWHPFTEEAIEQIKRDGITKLVILPLYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYKREGYIKAMANLIEKELKSFDCPEEVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELETRKITNACTLAYQSRVGPVEWLRPYTDETIVELGKKGVKSLLAVPISFVSEHIETLEEIDVEYKELALESGIEKWGRVPALGCEPTFISDLADAVIESLPYVGAMTASDLEAQQSLVPLGSVEELLAAYDSQRRELPPPVIVWEWGWTKSAETWNGRVAMLAVLLLLFFEFTADKGLLHQMGIWPLLR 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01990 532 ProSitePatterns Ferrochelatase signature. 309 330 IPR019772 GO:0004325|GO:0006783
Gma04g01990 532 CDD Ferrochelatase_C 288 426 IPR033644 -
Gma04g01990 532 Hamap Coproporphyrin III ferrochelatase [cpfC]. 118 443 IPR001015 GO:0004325|GO:0006783
Gma04g01990 532 PANTHER FERROCHELATASE-1, CHLOROPLASTIC/MITOCHONDRIAL 69 455 - -
Gma04g01990 532 PANTHER FERROCHELATASE 69 455 IPR001015 GO:0004325|GO:0006783
Gma04g01990 532 MobiDBLite consensus disorder prediction 1 20 - -
Gma04g01990 532 Gene3D - 281 424 - -
Gma04g01990 532 Gene3D - 119 442 - -
Gma04g01990 532 CDD Ferrochelatase_N 120 282 IPR033659 -
Gma04g01990 532 SUPERFAMILY Chlorophyll a-b binding protein 487 527 - -
Gma04g01990 532 SUPERFAMILY Chelatase 118 448 - -
Gma04g01990 532 Pfam Ferrochelatase 119 442 IPR001015 GO:0004325|GO:0006783
Gma04g01990 532 TIGRFAM hemH: ferrochelatase 118 443 IPR001015 GO:0004325|GO:0006783
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01990 Gma-Chr4 50330741 50335845 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01990 K01772 - gmx:100809157 1050.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01990 04 50330741 50335845 Gma06g01424 06 13540221 13545916 GST
Gma05g01939 05 40786615 40791917 Gma04g01990 04 50330741 50335845 PCT
Gma04g01990 04 50330741 50335845 Gma05g01939 05 40786615 40791917 PCT