Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00606 ATGAAGCAAGCTTCGTCGGAGGCAGTTCCGTCGCTTTCCTCGGCGCCGTCGTTCACGGAGGCGGCGACATCGTCGACGTCGTCCGCGGCAGCGGCGGAGGACCTGGCGGTGGGGTCGCGGGACGGAGGCGGCGGCGCGCAGGAGACGGTGGCGGTGGATCGGCGAGGCGAGTACTCGGCGGTGTGCCGATGGACGGTGCATAATTTCCCTCGAATAAAGGCTAGGGCACTGTGGAGCAAGTACTTCGAGGTAGGCGGTTACGATTGTCGGTTGCTAATATACCCCAAGGGTGACTCACAGGCGCTGCCTGGTTACATCTCCATTTACCTCCAAATCATGGACCCTCGCGGCACCTCTTCCTCCAAATGGGACTGTTTCGCCAGCTATCGTTTGGCAATCGTCAACCTCGCCGACGATTCCAAAACCATTCACCGCGATTCCTGGCACCGATTCTCCAGCAAGAAGAAATCCCACGGCTGGTGCGATTTCACGCCCTCCAACACTGTTTTCGACCCCAAATTGGGTTACCTCTTCAACACCGATTCTGTTTTGATCACCGCCGATATTCTCATCCTCAACGAGTCCGTCAATTTCACGCGCGACAACAATGAGGTGCAATCCTCGTCTTCCTCGTCCTCCAGTGCGATGACTTCCTCCGTGGTCGCGAGTCCCGTCTCTGATGTTTCCAGTGGGAAGTTCACTTGGAAAGTGCATAATTTCAGTCTGTTCAAGGAGATGATCAAGACGCAGAAGATAATGAGCCCGGTTTTCCCTGCGGGGGAGTGTAATTTGAGGATTAGTGTGTACCAGAGCTCCGTCAATGGGGTTGAGTATTTGTCCATGTGTTTGGAGAGCAAGGACACGGATAAGAGTGTGGTGTTGTCTGATAGAAGTTGCTGGTGTTTGTTTAGGATGTCTGTGTTGAACCAGAAGCCTGGTTCCAATCACATGCATAGGGATTCTTATGGGAGGTTTGCTGCGGATAACAAGAGTGGTGACAATACCAGCTTGGGGTGGAATGATTATATGAAGATGTTGGATTTCATTGACGCGGATTCGGGGTTCTTGGTGGATGACACTGCGGTTTTCAGCACCTCGTTTCATGTGATCAAGGAGTTTAGCAGCTTCTCCAAGAATGGGGCTGTGATTGCCGGGAGGAGTGGGAGTGGTGCAAGGAAGTCTGATGGACATGTTGGAAAGTTCACTTGGAGGATTGAGAATTTTACTAGGTTGAAGGATTTGCTGAAGAAGAGGAAAATTACGGGTCTGTGCATCAAGAGCAGGAGGTTTCAGATTGGTAATCGGGATTGTCGACTTATTGTTTACCCTAGAGGGCAGTCTCAGCCACCATGCCACCTTTCAGTGTTTCTTGAAGTTACTGATTCAAGAAATACTTCCAGTGATTGGAGTTGTTTTGTAAGTCATCGTTTGTCAGTTGTGAACCAAAGGATGGAGGATAAATCTGTCACCAAGGAATCTCAGAACCGGTACTCTAAAGCTGCGAAGGATTGGGGTTGGCGTGAATTTGTGACACTTACCAGTCTCTTTGATCAAGATTCAGGTTTTCTTGTCCAGGACACTGTCATATTCTCCGCTGAAGTTCTTATATTGAAAGAGACATCAATAATGCAGGATATTACTGAGAACGATTCCGAGTTAAGCAGCAGTGGTTCCCCAGTTGATAAAAGAAGTTCATTTACATGGAAAGTGGAGAATTTCCTTTCTTTTAAGGAAATAATGGAGACTCGAAAAATCTTCAGTAAATTCTTTCAGGCTGGTGGCTGTGAACTTCGGATTGGTGTATATGAGTCGTTTGACACCATATGTATTTATTTAGAGAGTGACCAGGCTGTTGGTAGTGACCCGGATAAAAATTTCTGGGTCAGATACAGGATGGCAGTTGTGAATCAAAAAAACCCAGCCAAGACAGTGTGGAAAGAATCTTCTATCTGCACAAAGACATGGAATAATTCAGTTTTGCAATTCATGAAGGTGTCTGATATGTTAGAAGCAGATGCAGGATTTCTTGTACGTGACACTGTTGTTTTTGTATGTGAAATATTGGATTGCTGCCCTTGGTTTGAGTTTTCAGATTTAGAGGTTTTAGCATCAGAGGATGATCAGGATGCATTGACTACTGATCCTGATGAGCTCATAGACTCTGAAGACAGTGAAGGGATAAGTGGAGACGAGGAAGATATTTTCAGAAATCTTCTTTCCAGAGCTGGATTTCATTTAACATATGGAGATAATCCTTCACAGCCACAGGTTACTTTAAGGGAGAAACTTCTAATGGATGCTGGTGCGATTGCGGGGTTTCTGACTGGACTTCGGGTTTATCTTGATGATCCTGCAAAAGTTAAGCGTCTGCTTCTACCTACCAAGCTCTCTGGCAGTTGTGATGGGAAGAAGGCCACCAAAGCTGATGAATCTTCCCCAAGTTTGATGAATTTGCTGATGGGAGTTAAAGTCTTGCAGCAAGCAATCATTGATTTACTATTGGATATAATGGTTGAGTGTTGCCAACCTTCCGAAGTGGGTCCTGTTGCTGATTCTGTTGATGCATGCTCTAAACCTTCTCCAAATGGAAGTGGAGCTGCAAGTCCTCTTGAGTGTGAAAGAGAAAATGGAGCAATGGAGTCTGCACGAGTCCCCGTATGTGAGAGGTTGGATTCTGTTGTTCAAGAAAGCAGTAATGCATCTGCTGTGCAGAGCTCTGATTTAAAAGGCAATGGTATTCAGGAAAAAGCACTTCCTGGACAGCCCATTTGTCCACCAGAAACATCTGCCACTGCGTCAGAAAATGCATCCCTTCGTTCAAAGACCAAGTGGCCAGAACAGTCCGAGGAGCTCTTAGGTTTGATTGTAAACTCACTAAGAGCTTTGGATGGGGCTGTTCCACAAGGCTGTCCAGAACCAAGACGGCGACCTCAGTCTGCACAAAAAATTGCTCTTGTATTGGACAAGGCTCCTAAGCATTTACAAGCAGACCTAGTTGCTCTGGTGCCCAAATTGGTTGAGCAGTCAGAACACCCACTGGCTGCCTGTGCACTTCTTGAGCGACTTCAAAACCCAGAGGCGGAACCTGCTTTACGAATACCTGTTTATGGGGCTCTTAGTCAATTGGAGTGTGGTAGTGAAGTGTGGGAACGCATTCTGTTTCAGTCATTTGAGCTTTTGACAGACTCAAATGATGAACCCCTAACTGCAACAATAAATTTTATATTCAAAGCGGCATCTCAATGTCAACACCTCCCTGAAGCAGTTAGATCTGTTCGTGTCAGGCTGAAAAATCTAGGTCTTGAGGTGTCACCTTGCGTCCTTGACTTTTTGAGTAAGACTATAAATAGTTGGGGGGATGTTGCTGAAACCATACTTAGGGACATTGATTGTGACGATGATTGTGGTGACAGTTGCTCGGCTTTGCCATGTGGGATTTTCTTATTTGGTGAACATGGCACTGCTCCCAGTGGATTGCATGTGATTGATGAGCAGGCTTATCATGCTAGTCGTCACTTTTCTGATATTTATATACTGTTTGAAATGTTATCTATTCCTTGCCTTGTTGCTGAAGCTTCTCAAACATTTGAGAGAGCTGTAGCTCGAGGTGCAATAAGTGCCCAGTCTGTAACCCTAGTATTACAAAGCCGTCTTTCCCAAAGATTGAACAATAATGGCAGCTATGCTTCTGAAAATTTCCAGCATTCAGATGGTGCTACAGAGGGAGATGCCTGTGAGCAATTGGGAGTTCAAAGGGATGATTACACTTCTGTTCTTGGTCTTGCTGAAAATTTGGCCCTCTCTAAAGACCCATGCGTGAAAGAATTTGTGAAACTTCTCTACATGATAATGTTTAGATGGTTTGCCAATGAATCTCATCGGGGGAGGATGCTGAAGAGGCTTGTTGACCGTGCCACTAGCAATACGGACAATGGTCGTGAAGTAGATTTTGATTTGGATATCTTGGTTACTTTGGTCTGTGAGGAGCAGGAGTTTATCAGGCCTGTTTTGAGTATGATGCGTGAAGTAGCTGAACTTGCAAATGTTGATCGGGCTGCTCTATGGCACCAGTTATGTGCCAGTGAAGATGAAATTGTGCGTGTTCGTGAAGAAAGCAAAAATGAGATTTCTAATATGGCTAAGGAAAAAGTTATGATATCGCAAAAGCTGAGTGAATCTGAGGCCACAAACAATCGCTTGAAGTCTGAAATGAGGACTGAGATGGATCGGTTTTCTCGGGAAAAGAAGGAACTAGCAGAACAAATTCAAGAAGTTGAGAGTCAGCTTGAATGGATCCGCTCAGAACGGGATGATGAAATCGCAAAGCTCTCTGCAGAGAAGAAAGCTCTTCATGACCGTTTACATGATGCAGAGACACAACTTTCTCAATTGAAGTCTCGGAAACGTGATGAATTAAAGAAAGTAGTCAAGGAGAAAAATGCTCTTGCTGAAAGATTGAAGAATGCTGAAGCTGCACGCAAGAGATTTGACGAAGAACTGAAAAGATTTGCAACAGAGAATGTGACCCGGGAAGAAATCCGGCAATCACTCGAAGATGAAGTTCGTAGATTGACTCAAACAGTTGGGCAAACTGAAGGGGAAAAGCGGGAGAAGGAAGAACAGGTTGCTAGGTGTGAAGCATATATTGATGGCATGGAATCAAAGTTGCAAGCTTGCCAGCAATATATTCACACACTTGAGGCCTCACTCCAGGAGGAAATGTCAAGACATGCCCCTCTATATGGTGCTGGTCTGGAGGCTTTATCATTGAAAGAGTTGGAAACACTATCACGTATTCATGAAGATGGGCTTAGGCAGATCCATGCCCTTCAACAGCGTAAAGGGAGTCCTGCCGGGAGCCCTCTTGTGAGTCCCCATGCTCTCCCTCACACCCATGGATTATATCCAACTGCGGCCCCCCCAATGGCCGTGGGTCTGCCTCCCTCAATAATCCCAAATGGTGTAGGGATCCACAGCAACGGCCATGTGAATGGTGGTGCAGTTGGACCCTGGTTATTCGTTTTAGaagtcaaaaaaagaagatttcaaGTAAAAAATATTGGATTCACTGGGGTTTTCTGGTTGATCTTCAATCCACTAGTAGATGAGTTCCCTGCTTTTGGAGCTGTTTACTTTTCCTTGAAAGAGAAGAGAGATCTGGATTTTACTCTCAAGGTTATTGGTGGCGATTTATCAACTTTACCGGGGATATCTGATGCTATAGAGGAAACAATTAGAGATGCCATTGAAGACTCTATAACTTGGCCAGTACGCAAAGTTATACCAATTCTACCCGGGGATTACAGTAATCTAGAGTTGAAACCGGTTGGAATACTAGAAGTAAAACTAGTGCAAGCTAAGAACTTAACAAATAAAGATATAATTGGGAAATCCGATCCTTATGCTGTCATATTTGTACGCCCCCTCCGTGACAGAACCAAAACCAGTAAAATAATGAACAACCAGCTTCTGAACTTCTTGGCTTCGCTGAAGGACCTTGAACCTGGTAAAGTCAAGGACGTGTGGCTTAAGCTGGTTAAGGATTTGGAGGTCCATAGAGATAACGAAATGTTAATTCTTGAAGTCTACGATCATGATACGTTTGGCAAGGAAAAAATTGGAAGAGTGATCTTGACACTGACCAAGGTCATCTTAGAAGGGGAATACAATGAAACTTATCCTCTAGATGGCGCTAAATCGGGAAATATTTCTTTGCATTTGAAGTGGACTCCACAGCACAATTTTCGGGATCCTTAG 5757 0.4504 MKQASSEAVPSLSSAPSFTEAATSSTSSAAAAEDLAVGSRDGGGGAQETVAVDRRGEYSAVCRWTVHNFPRIKARALWSKYFEVGGYDCRLLIYPKGDSQALPGYISIYLQIMDPRGTSSSKWDCFASYRLAIVNLADDSKTIHRDSWHRFSSKKKSHGWCDFTPSNTVFDPKLGYLFNTDSVLITADILILNESVNFTRDNNEVQSSSSSSSSAMTSSVVASPVSDVSSGKFTWKVHNFSLFKEMIKTQKIMSPVFPAGECNLRISVYQSSVNGVEYLSMCLESKDTDKSVVLSDRSCWCLFRMSVLNQKPGSNHMHRDSYGRFAADNKSGDNTSLGWNDYMKMLDFIDADSGFLVDDTAVFSTSFHVIKEFSSFSKNGAVIAGRSGSGARKSDGHVGKFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSQPPCHLSVFLEVTDSRNTSSDWSCFVSHRLSVVNQRMEDKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVIFSAEVLILKETSIMQDITENDSELSSSGSPVDKRSSFTWKVENFLSFKEIMETRKIFSKFFQAGGCELRIGVYESFDTICIYLESDQAVGSDPDKNFWVRYRMAVVNQKNPAKTVWKESSICTKTWNNSVLQFMKVSDMLEADAGFLVRDTVVFVCEILDCCPWFEFSDLEVLASEDDQDALTTDPDELIDSEDSEGISGDEEDIFRNLLSRAGFHLTYGDNPSQPQVTLREKLLMDAGAIAGFLTGLRVYLDDPAKVKRLLLPTKLSGSCDGKKATKADESSPSLMNLLMGVKVLQQAIIDLLLDIMVECCQPSEVGPVADSVDACSKPSPNGSGAASPLECERENGAMESARVPVCERLDSVVQESSNASAVQSSDLKGNGIQEKALPGQPICPPETSATASENASLRSKTKWPEQSEELLGLIVNSLRALDGAVPQGCPEPRRRPQSAQKIALVLDKAPKHLQADLVALVPKLVEQSEHPLAACALLERLQNPEAEPALRIPVYGALSQLECGSEVWERILFQSFELLTDSNDEPLTATINFIFKAASQCQHLPEAVRSVRVRLKNLGLEVSPCVLDFLSKTINSWGDVAETILRDIDCDDDCGDSCSALPCGIFLFGEHGTAPSGLHVIDEQAYHASRHFSDIYILFEMLSIPCLVAEASQTFERAVARGAISAQSVTLVLQSRLSQRLNNNGSYASENFQHSDGATEGDACEQLGVQRDDYTSVLGLAENLALSKDPCVKEFVKLLYMIMFRWFANESHRGRMLKRLVDRATSNTDNGREVDFDLDILVTLVCEEQEFIRPVLSMMREVAELANVDRAALWHQLCASEDEIVRVREESKNEISNMAKEKVMISQKLSESEATNNRLKSEMRTEMDRFSREKKELAEQIQEVESQLEWIRSERDDEIAKLSAEKKALHDRLHDAETQLSQLKSRKRDELKKVVKEKNALAERLKNAEAARKRFDEELKRFATENVTREEIRQSLEDEVRRLTQTVGQTEGEKREKEEQVARCEAYIDGMESKLQACQQYIHTLEASLQEEMSRHAPLYGAGLEALSLKELETLSRIHEDGLRQIHALQQRKGSPAGSPLVSPHALPHTHGLYPTAAPPMAVGLPPSIIPNGVGIHSNGHVNGGAVGPWLFVLEVKKRRFQVKNIGFTGVFWLIFNPLVDEFPAFGAVYFSLKEKRDLDFTLKVIGGDLSTLPGISDAIEETIRDAIEDSITWPVRKVIPILPGDYSNLELKPVGILEVKLVQAKNLTNKDIIGKSDPYAVIFVRPLRDRTKTSKIMNNQLLNFLASLKDLEPGKVKDVWLKLVKDLEVHRDNEMLILEVYDHDTFGKEKIGRVILTLTKVILEGEYNETYPLDGAKSGNISLHLKWTPQHNFRDP 1918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00606 1918 ProSiteProfiles C2 domain profile. 1758 1893 IPR000008 -
Gma04g00606 1918 Gene3D - 1431 1624 - -
Gma04g00606 1918 CDD MATH 231 363 IPR002083 GO:0005515
Gma04g00606 1918 CDD MATH 399 534 IPR002083 GO:0005515
Gma04g00606 1918 Gene3D C2 domain 1773 1916 IPR035892 -
Gma04g00606 1918 Pfam C2 domain 1777 1895 IPR000008 -
Gma04g00606 1918 CDD MATH 63 189 IPR002083 GO:0005515
Gma04g00606 1918 Coils Coil 1514 1541 - -
Gma04g00606 1918 Coils Coil 1390 1435 - -
Gma04g00606 1918 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 45 196 IPR008974 GO:0005515
Gma04g00606 1918 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 389 543 IPR008974 GO:0005515
Gma04g00606 1918 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 548 689 IPR008974 GO:0005515
Gma04g00606 1918 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 222 373 IPR008974 GO:0005515
Gma04g00606 1918 ProSiteProfiles MATH/TRAF domain profile. 230 367 IPR002083 GO:0005515
Gma04g00606 1918 Coils Coil 1440 1506 - -
Gma04g00606 1918 CDD MATH 565 687 IPR002083 GO:0005515
Gma04g00606 1918 ProSiteProfiles MATH/TRAF domain profile. 398 534 IPR002083 GO:0005515
Gma04g00606 1918 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1775 1913 IPR035892 -
Gma04g00606 1918 PANTHER TRAF-LIKE FAMILY PROTEIN 27 1672 - -
Gma04g00606 1918 PANTHER TRAF-LIKE FAMILY PROTEIN 27 1672 - -
Gma04g00606 1918 ProSiteProfiles MATH/TRAF domain profile. 59 189 IPR002083 GO:0005515
Gma04g00606 1918 MobiDBLite consensus disorder prediction 926 942 - -
Gma04g00606 1918 MobiDBLite consensus disorder prediction 1387 1407 - -
Gma04g00606 1918 MobiDBLite consensus disorder prediction 898 943 - -
Gma04g00606 1918 SMART math_3 61 169 IPR002083 GO:0005515
Gma04g00606 1918 SMART math_3 568 668 IPR002083 GO:0005515
Gma04g00606 1918 SMART math_3 235 348 IPR002083 GO:0005515
Gma04g00606 1918 SMART math_3 403 515 IPR002083 GO:0005515
Gma04g00606 1918 ProSiteProfiles MATH/TRAF domain profile. 563 687 IPR002083 GO:0005515
Gma04g00606 1918 SMART C2_3c 1778 1892 IPR000008 -
Gma04g00606 1918 SUPERFAMILY TRAF domain-like 228 373 - -
Gma04g00606 1918 SUPERFAMILY TRAF domain-like 399 540 - -
Gma04g00606 1918 Pfam MATH domain 68 191 IPR002083 GO:0005515
Gma04g00606 1918 Pfam MATH domain 576 683 IPR002083 GO:0005515
Gma04g00606 1918 Pfam MATH domain 430 536 IPR002083 GO:0005515
Gma04g00606 1918 SUPERFAMILY TRAF domain-like 564 688 - -
Gma04g00606 1918 SUPERFAMILY TRAF domain-like 58 197 - -
Gma04g00606 1918 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00606 Gma-Chr4 5517302 5532864 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00606 - - gmx:100780104 3232.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00606 04 5517302 5532864 Gma04g00606 04 5517302 5532864 ECH
Gma04g00606 04 5517302 5532864 Gma06g00589 06 5324834 5330066 GST