Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00540 ATGAGGTTGCATCATGTGAGGAATCGAGACAAGTGCATTGCTGGCTTTGGGCGTGTGAGCATGAAAGCACACGAGGAGGTGCAAAAGATCTCAATTAACGGCTTTTATTATAGTATTTCAATATTTTTCACCCCACTAATTACTCTCTACACTTTCAGTTCTACAATACAAGATTGTTCAACAATGGAATGTAATGATCAGCATGTAAGTGTAAACTTGAAGAGAAAATCACCAGAAAATGGAGAACGTGTACTCTTCAACACCTTTTCTCTTGATGACCTTAATGAAGATCTCTTTGAAAGGATACTTTCATGGCTTCCAACTTCCACATTCTTTCGCCTGAATTCTGTGTGCAAAAGATGGAAATCAGTAGCTGCTTCTGCCAGTTTCAAGCTTGCCTGCTCTCACATTCCCTCAAGGGATCCTTGGTTTTTAATGGTTGCTCCCAACCTTAACCAATCTGTTATCCTTGACTCTGCTGAAAGCACTTGGAAGAGGCTAAATCACCCCCCTCTTCTGCAAGAAGAATCTAACCAAGATTGCGTGCCAGTTGCGGCATCCGGGGGTTTGATTTGCTACCGTAAATCATCAGGAAACTTCATTGTAACCAACCCCGTGACAGGTTCTTGTAGAAAACTCCCTCCACTGCAATTTGCCTCACAAAACCAACCACTCAATGCCATTGTGATGAGCACAAGTTCCAAAGACCAACTCTCCTTCAAAATTGTGCTAGTCTTTGGTGAACTTCCAAATCTCTTGTTTAAAGTCTACAATTCAGGTTCTAACTGTTGGGAGGGTGAGACAGCATTGAGGAGAAAGACTGAAGACAATTCCATTGAATATGATTCCACTGATGACAATGTTGTGTACTTCCTCAGCAAGGCTGGATTTGTTGTGGCGAGCAACATGCAGAGAAGCCCCTCTAAGCAATTTTCATCTGTTATTACTAACAAAGATGGTCAAGAGATTGTCTATTTTCTTAGCTCCTCAGGGAATGTAGTAGCTTGCAATTTGACATGCAAGTGCTTCTTTGAGTACCCCAGGTTGTTGCCTGTTTTTAGTGAGTATTCCATTGATGTTGTGGAATGCAATGGGGAGATGCTGGTTGTTTTGTTATCAGAATTCTTAGAAATTGCAACTCTTAGGGTGTGGAAATATGATGAAGCTAGTAGAGGGTGGCATCAGATTGCAGCAATGCCTGCAGCAAATTCTCATGAGTGGTATGGGAAGAAGGCAGATATTAACTGTGTTGGTGCTGGTAACCAAATCTTCATATGCTTGAACTCCCCTGAGCTATGCACTTATGTTGTGTGTGATTTGGAGACCAACAAGTGGGTTGAATTTCCAAAATGTTGCATAAATGGAGAAGTCATAGACTTTATGTCTGCCCTTTCATTTGAGCCTCGGATTGAGGCTTCAGTGTGA 1425 0.4182 MRLHHVRNRDKCIAGFGRVSMKAHEEVQKISINGFYYSISIFFTPLITLYTFSSTIQDCSTMECNDQHVSVNLKRKSPENGERVLFNTFSLDDLNEDLFERILSWLPTSTFFRLNSVCKRWKSVAASASFKLACSHIPSRDPWFLMVAPNLNQSVILDSAESTWKRLNHPPLLQEESNQDCVPVAASGGLICYRKSSGNFIVTNPVTGSCRKLPPLQFASQNQPLNAIVMSTSSKDQLSFKIVLVFGELPNLLFKVYNSGSNCWEGETALRRKTEDNSIEYDSTDDNVVYFLSKAGFVVASNMQRSPSKQFSSVITNKDGQEIVYFLSSSGNVVACNLTCKCFFEYPRLLPVFSEYSIDVVECNGEMLVVLLSEFLEIATLRVWKYDEASRGWHQIAAMPAANSHEWYGKKADINCVGAGNQIFICLNSPELCTYVVCDLETNKWVEFPKCCINGEVIDFMSALSFEPRIEASV 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00540 474 Pfam F-box domain 91 126 IPR001810 GO:0005515
Gma04g00540 474 SMART fbox_2 94 134 IPR001810 GO:0005515
Gma04g00540 474 ProSiteProfiles F-box domain profile. 88 133 IPR001810 GO:0005515
Gma04g00540 474 Gene3D - 85 131 - -
Gma04g00540 474 PANTHER F-BOX PROTEIN FAMILY, ATFBX13-LIKE PROTEIN 84 474 - -
Gma04g00540 474 SUPERFAMILY F-box domain 88 146 IPR036047 GO:0005515
Gma04g00540 474 PANTHER F-BOX/KELCH-REPEAT PROTEIN 84 474 - -
Gma04g00540 474 SUPERFAMILY Kelch motif 150 451 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00540 Gma-Chr4 4846669 4850251 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00540 - - gmx:100786481 847.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00540 04 4846669 4850251 Gma06g00530 06 4522681 4533580 GST