LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma04g00467	ATGGCTCTTCTGAGTCGAGCCTCTTCACGCTTCCCTCAGCTGGTTTCCCCTCAAAGAGTTGTTTCCCTCCACACAACGCTCCCATCTCTTAACGCATCAACATCCACACCCACGCCCGCCCCATATGCCCCGCCACCGCCTCCGTCCGCTTCCCCTCCCGCCGGCGTGTCGAAGGCGGCGGAGTTCGTGATCTCGAAGGTTGACGATCTGATGAACTGGGCCCGGCGCGGCTCCATCTGGCCCATGACCTTCGGCCTCGCCTGCTGCGCCGTCGAAATGATGCACACCGGCGCCGCCCGCTACGATCTCGACCGCTTCGGCATCATTTTCAGGCCCAGCCCTCGCCAGTCTGATTGCATGATCGTCGCTGGCACTCTCACCAACAAGATGGCTCCCGCTCTTCGCAAGGTTTATGACCAAATGCCTGAGCCTAGATGGGTTGTCTCAATGGGAAGTTGTGCTAATGGAGGAGGATACTACCATTACTCTTACTCCGTAGTTCGGGGATGTGACAGGATTGTTCCTGTTGACATATATATTCCAGGCTGTCCTCCAACTGCTGAGGCTTTGCTGTATGGACTCCTCCAGCTGCAGAAAAAGATCAATAGGCGCAAAGACTTCCTCCATTGGTGGACAAAGTGA	642	0.5654	MALLSRASSRFPQLVSPQRVVSLHTTLPSLNASTSTPTPAPYAPPPPPSASPPAGVSKAAEFVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYIPGCPPTAEALLYGLLQLQKKINRRKDFLHWWTK	213

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma04g00467	213	Gene3D	-	59	213	-	-
	Gma04g00467	213	MobiDBLite	consensus disorder prediction	38	53	-	-
	Gma04g00467	213	ProSitePatterns	Respiratory-chain NADH dehydrogenase 20 Kd subunit signature.	169	185	IPR006138	GO:0008137\|GO:0048038\|GO:0051539
	Gma04g00467	213	SUPERFAMILY	HydA/Nqo6-like	61	205	-	-
	Gma04g00467	213	Hamap	NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK].	54	202	IPR006138	GO:0008137\|GO:0048038\|GO:0051539
	Gma04g00467	213	PANTHER	NADH DEHYDROGENASE [UBIQUINONE] IRON-SULFUR PROTEIN 7, MITOCHONDRIAL	1	213	-	-
	Gma04g00467	213	MobiDBLite	consensus disorder prediction	29	55	-	-
	Gma04g00467	213	PANTHER	NADH DEHYDROGENASE	1	213	-	-
	Gma04g00467	213	TIGRFAM	nuoB_fam: NADH-quinone oxidoreductase, B subunit	62	203	IPR006138	GO:0008137\|GO:0048038\|GO:0051539
	Gma04g00467	213	Pfam	NADH ubiquinone oxidoreductase, 20 Kd subunit	88	197	IPR006137	GO:0051536

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma04g00467	Gma-Chr4	4176947	4179786	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma04g00467	K03940		-	gmx:100817153	377.481

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma04g00467	04	4176947	4179786	Gma04g00467	04	4176947	4179786	ECH
	Gma04g00467	04	4176947	4179786	Gma06g00461	06	3948017	3950060	GST
	Gma14g00848	14	9100854	9106434	Gma04g00467	04	4176947	4179786	PCT
	Gma04g00467	04	4176947	4179786	Gma14g00848	14	9100854	9106434	PCT