Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00401 ATGCATCAAGGTTCATCCCTCTCAGTGGAGGAACCAAAAGATGTCATGCTCTCACcaaatgccatgttctctgcgggcttttatgctgttggtgaaaacgcatattccttcgCCGTTTGGTATTCCGAACCCAATGGCCGACCCCCAAACCCAACCTTCGTATGGATGGCAAACCGTGACCAACCAGTGAACGGCAAGCGCTCAAAGTTTTCGCTACTTGGCAACGGCAATCTCGTCTTAAACGACGCTGACGGCTCCGTCGTTTGGTCGACGGACATTGTTTCATCTTCCTCCGCAGTGCATCTATCTCTCGACAACACCGGTAACCTCGTTCTCCGTGAAGCGAATGACAGGCGCGACGTCGTTTTGTGGCAAAGCTTTGATTCCCCTACGGATACCCTTCTGCCTCAGCAAGTGTTCACGAGACACTCGAAACTTGTCTCTTCTAGAAGCGAGACAAACATgtcctcgggtttctacaccttgttcttcgacaatgacaacgttcttcgtcttctttacgatggtcctgatgtttctggcccttactggccagatccatggttggccccttgggacgctGGAAGGTCCAGTTACAACAACAGCAGAGTTGCTGTGATGGACACACTCGGCAGTTTTAATTCCTCAGATGATTTCCATTTCATGACTTCTGATTACGGCAAAGTCGTCCAAAGAAGGTTGATCATGGATCACGATGGAAACATTCGTGTTTACAGTCGGAGACACGGTGGAGAGAAATGGTCTGTTACGTGGCAAGCCAAATCAACACCGTGTAGCATTCATGGAATTTGTGGCCCCAATAGTTTGTGCTCTTATCATCAAAATTCTGGCTTGAAGTGCTCTTGCCTTCCCGGGTATAAGAGGAAGAACGATAGCGATTGGTCTTATGGCTGTGAACCGAAAGTTCATCCATCTTGCAAAAAAACAGAGTCTCGGTTCTTGTATGTACCCAACGTTAAGTTATTTGGTTTTGACTATGGGGTCAAGGAAAATTACACGCTCAAGGAGTGTAAGGAGTTATGCCTTCAATTATGCAATTGCAAAGGGATCCAGTATACCTTTTACGATACCAAAGGGACTTATACCTGCTACCCAAAGTTGCAGTTGCGGCATGCCAGTAGTATACAGTATTTTACTGATGATTTGTATTTGAAACTCCCAGCAAGCAGTTCATATTCTAATGAGGGGTCCACAGATGAGCAAGGTCTTAATTGTTCTTCGAGAACGATAAAGATTGAGAGGACATATGACAAGGGTCATGAAAACAGGTATGTTAAGTTCTTGGTTTGGTTTGCAACGGGAGTGGGAGGACTTGAACTTCTGTGCGCATTTGTGGTTTGGTTTTTTCTGGTGAGAACAACGGGGAAACAAGATTCTGGTGCAGATGGGCGGGTCTACGCTCTGGCCGGTTTTAGAAAATTCAGTTATTCTGAGCTGAAACAAGCCACCAAAGGGTTTAGTCAAGAGATAGGAAGGGGTGCAGCAGGGGTTGTATACAAAGGTGTGTTGTTGGATCAACGAGTTGCGgcagtgaagagactgaaggatgctaatcaaggagaagaagagttcctcgcggaaGATATTGAAGCCACAGATAATGGAGTAGTAAACCAGCATCTCAGCATGGTCACGTGGCTTAAAGAGAGGCAGAAAAATGGATTTACGTGTGTTAGTGAAATCTTAGACCCCACGGTAGAAGGAGTATATGATGAGGGTAAGATGGAAACTTTGGCTAGAGTGGCTCTGCAATGCATAGAGGAAGAGAAGGACAAGAGGCCCACCATGAGCCAAGTAGTAGAGATGCTTCAGGAATCTAGCCGCGAAACTCATAATCGGTGA 1863 0.4026 MHQGSSLSVEEPKDVMLSPNAMFSAGFYAVGENAYSFAVWYSEPNGRPPNPTFVWMANRDQPVNGKRSKFSLLGNGNLVLNDADGSVVWSTDIVSSSSAVHLSLDNTGNLVLREANDRRDVVLWQSFDSPTDTLLPQQVFTRHSKLVSSRSETNMSSGFYTLFFDNDNVLRLLYDGPDVSGPYWPDPWLAPWDAGRSSYNNSRVAVMDTLGSFNSSDDFHFMTSDYGKVVQRRLIMDHDGNIRVYSRRHGGEKWSVTWQAKSTPCSIHGICGPNSLCSYHQNSGLKCSCLPGYKRKNDSDWSYGCEPKVHPSCKKTESRFLYVPNVKLFGFDYGVKENYTLKECKELCLQLCNCKGIQYTFYDTKGTYTCYPKLQLRHASSIQYFTDDLYLKLPASSSYSNEGSTDEQGLNCSSRTIKIERTYDKGHENRYVKFLVWFATGVGGLELLCAFVVWFFLVRTTGKQDSGADGRVYALAGFRKFSYSELKQATKGFSQEIGRGAAGVVYKGVLLDQRVAAVKRLKDANQGEEEFLAEDIEATDNGVVNQHLSMVTWLKERQKNGFTCVSEILDPTVEGVYDEGKMETLARVALQCIEEEKDKRPTMSQVVEMLQESSRETHNR 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00401 620 Gene3D - 1 128 IPR036426 -
Gma04g00401 620 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 534 - -
Gma04g00401 620 Gene3D Transferase(Phosphotransferase) domain 1 542 619 - -
Gma04g00401 620 Gene3D Phosphorylase Kinase; domain 1 462 541 - -
Gma04g00401 620 SMART blect_4 4 130 IPR001480 -
Gma04g00401 620 Pfam S-locus glycoprotein domain 220 296 IPR000858 GO:0048544
Gma04g00401 620 CDD PAN_AP_plant 309 394 - -
Gma04g00401 620 SUPERFAMILY alpha-D-mannose-specific plant lectins 52 185 IPR036426 -
Gma04g00401 620 Pfam PAN-like domain 313 370 IPR003609 -
Gma04g00401 620 ProSiteProfiles PAN/Apple domain profile. 313 389 IPR003609 -
Gma04g00401 620 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 538 615 - -
Gma04g00401 620 CDD B_lectin 17 130 IPR001480 -
Gma04g00401 620 ProSiteProfiles Bulb-type lectin domain profile. 1 125 IPR001480 -
Gma04g00401 620 Pfam D-mannose binding lectin 52 145 IPR001480 -
Gma04g00401 620 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 538 615 - -
Gma04g00401 620 SUPERFAMILY Protein kinase-like (PK-like) 475 534 IPR011009 -
Gma04g00401 620 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 1 534 - -
Gma04g00401 620 SMART ntp_6 315 393 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00401 Gma-Chr4 3477118 3479448 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00401 409 590 Receptor kinase-like Gene Family AT5G38260 29.843 8.83e-12 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00401 - - gmx:100819308 1101.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00401 04 3477118 3479448 Gma06g00388 06 3354034 3356451 GST