Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01979 ATGAAGTTGAGGTCTTCAATCGCATTTATTTGCATTCTGGCGAGTGTGAGTGTGACAATTTCAGAATCATTAAGCCAACAAGAGCAATTGTCAGCATATGAAGTTCTTGAGAAATACGATCTCCCAGTGGGGCTTCTTCCAAAAGGTGCCACAGGGTATGAGCTAAACGAAAAAAACGGGCACTTCACAGCGTATTTGAATGGAACATGCTACTTCAGCATAGAGTCGTATGAGCTAAAGTACAAGTCCACAATCAAGGGCGTGATCTCCAAGGGCAAGTTGTCGAAGCTGAAGGGTATTAGTGTGAAGATTGAAGTGTTGTGGCTCAAAATCGTGGAGGTCACTCGCGACGGCGATGACCTCCAATTCTCGGTGGGTGTTGCCTCTGCTGGCTTCAGCGTCGACAGCTTCTCAGAGAGCCCCCAGTGTGGGTGTGGATTCGATTGCAACTATTTCAATCAAAACGGTGATGTTTCTTCTCTTTAG 486 0.4609 MKLRSSIAFICILASVSVTISESLSQQEQLSAYEVLEKYDLPVGLLPKGATGYELNEKNGHFTAYLNGTCYFSIESYELKYKSTIKGVISKGKLSKLKGISVKIEVLWLKIVEVTRDGDDLQFSVGVASAGFSVDSFSESPQCGCGFDCNYFNQNGDVSSL 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01979 161 PANTHER DUF538 FAMILY PROTEIN 12 156 - -
Gma03g01979 161 Pfam Protein of unknown function, DUF538 32 137 IPR007493 -
Gma03g01979 161 Gene3D - 14 143 IPR036758 -
Gma03g01979 161 SUPERFAMILY At5g01610-like 8 149 IPR036758 -
Gma03g01979 161 PANTHER T31J12.3 PROTEIN-RELATED 12 156 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01979 Gma-Chr3 45484962 45485761 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01979 - - gmx:100527514 296.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01979 03 45484962 45485761 Gma03g01979 03 45484962 45485761 ECH
Gma03g01979 03 45484962 45485761 Gma19g02012 19 49104841 49105651 ECH
Gma19g02012 19 49104841 49105651 Gma03g01979 03 45484962 45485761 GST
Gma03g01979 03 45484962 45485761 Gma10g00168 10 1550664 1551526 PCT
Gma03g01979 03 45484962 45485761 Gma02g00163 02 1541499 1542400 PCT
Gma10g00168 10 1550664 1551526 Gma03g01979 03 45484962 45485761 PCT
Gma02g00163 02 1541499 1542400 Gma03g01979 03 45484962 45485761 PCT