Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00163 ATGATGTCTTCAATTAGATTCCTATGGATCCTGGTGGTGTGTTTGACGGCATCATGCGCGCTAAGCCAACCGCAGAAGCTATCAGCGTACGATGTTCTCATGGAGTACGGCTTCCCGGTGGGTCTTCTTCCGAAGGGAGCCATAGGGTATTCACTGAACAGAGACAGCGGCGAGTTCGCTGTGTATTTTGAAGGAGCCTGCAGCTTCGACATAGAATCCTACGCGCTCAAGTACAAGTCCACAATCACGGGTGTGATCTCCAAGGGCAGGCTCTACAATCTCAAAGGTGTCACCGTCAAAATCTTGCTCCTGTGGCTCAACATCGTCGAGGTCTCTCGTCAGGGCAACGATATTTACTTCTCTGTCGGCATCGCTTCCGCTGATTTCGGCGTCGAGAACTTCCTCGAGAGCCCCCAATGTGGTTGTGGCTTCGATTGCAAAACGCTCCCCTTAAACGGTGACGTTTACGTTTCCTCAATTTAA 483 0.5093 MMSSIRFLWILVVCLTASCALSQPQKLSAYDVLMEYGFPVGLLPKGAIGYSLNRDSGEFAVYFEGACSFDIESYALKYKSTITGVISKGRLYNLKGVTVKILLLWLNIVEVSRQGNDIYFSVGIASADFGVENFLESPQCGCGFDCKTLPLNGDVYVSSI 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00163 160 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Gma02g00163 160 Gene3D - 15 137 IPR036758 -
Gma02g00163 160 PANTHER T31J12.3 PROTEIN-RELATED 9 150 IPR007493 -
Gma02g00163 160 Pfam Protein of unknown function, DUF538 29 134 IPR007493 -
Gma02g00163 160 PANTHER DUF538 FAMILY PROTEIN 9 150 - -
Gma02g00163 160 SUPERFAMILY At5g01610-like 7 146 IPR036758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00163 Gma-Chr2 1541499 1542400 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00163 - - gmx:100500410 324.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00163 02 1541499 1542400 Gma02g00163 02 1541499 1542400 ECH
Gma02g00163 02 1541499 1542400 Gma10g00169 10 1555072 1556134 ECH
Gma10g00168 10 1550664 1551526 Gma02g00163 02 1541499 1542400 GST
Gma19g02012 19 49104841 49105651 Gma02g00163 02 1541499 1542400 PCT
Gma03g01979 03 45484962 45485761 Gma02g00163 02 1541499 1542400 PCT
Gma02g00163 02 1541499 1542400 Gma19g02012 19 49104841 49105651 PCT
Gma02g00163 02 1541499 1542400 Gma03g01979 03 45484962 45485761 PCT