Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01833 ATGACTATGAGGTTAGAAGGCAAGGTGGCACTAATAACCGGTGGAGCCAGTGGCATCGGCGAAGCCACCGCAAGGCTTTTCCTTTGCCACGGTGCCAAGGTCATCATCGCTGACATCCAAGACAACCTCGGACACTCCCTCTGCCAAAACCTCAACTCCTCCGACAACAACATTTCCTACGTTCACTGCGACGTCACCAACGATAACGACGTCCAAAACGCCGTCAACGCCGCCGTCTCGCGTCACGGCAAGCTCGACATCCTGTTCAGTAACGCCGGCACTGTTGGCCGTGTGAGCCCTTCCATCACGGCGTTTGACAACGCTGACTTGAAGAGGGTTTTCGAGGTGAATGTCTTCGGTGCTTTCTACGCCGCCAAACACGCGGCTAAGGTAATGATTCCTGAAAAGAGAGGGAGCATTGTGCTCACCTCAAGTGTTGCTTCGGTGACTCACGCGGTTTCGCCGCATGCATACACTGCGTCGAAGCACGCGGTGGTGGGTCTGATGAAGAACCTGTGCGTGGAACTGGGGAATCATGGAATCAGAGTTAACTGTGTTTCACCGTACGCGGTGGCCACTCCTCTGATGACACGTGGAACCAGGATGAAGAAGGAGATGGTAGAGAAAGTGTATTCTGAGGCGGGGAACCTGAAGGGAGTGGTTTTGAAGGAAGAGGATTTGGCAGAAGCAGCTCTGTTTCTGGCTAGTGATGAGTCAAAGTACGTGAGTGGGGTTAACCTAGTTGTGGATGGAGGTTACAGTGTCACCAATGTTTCTGTTAAAGAAGCTGTGAGAAAGTTTTCTGGTAAGCCCAAGTTGTAA 822 0.5231 MTMRLEGKVALITGGASGIGEATARLFLCHGAKVIIADIQDNLGHSLCQNLNSSDNNISYVHCDVTNDNDVQNAVNAAVSRHGKLDILFSNAGTVGRVSPSITAFDNADLKRVFEVNVFGAFYAAKHAAKVMIPEKRGSIVLTSSVASVTHAVSPHAYTASKHAVVGLMKNLCVELGNHGIRVNCVSPYAVATPLMTRGTRMKKEMVEKVYSEAGNLKGVVLKEEDLAEAALFLASDESKYVSGVNLVVDGGYSVTNVSVKEAVRKFSGKPKL 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01833 273 Gene3D - 1 268 - -
Gma03g01833 273 CDD secoisolariciresinol-DH_like_SDR_c 4 254 IPR045309 GO:0016616
Gma03g01833 273 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 255 IPR036291 -
Gma03g01833 273 PANTHER SECOISOLARICIRESINOL DEHYDROGENASE-LIKE 2 262 - -
Gma03g01833 273 Pfam Enoyl-(Acyl carrier protein) reductase 14 254 - -
Gma03g01833 273 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 IPR002347 -
Gma03g01833 273 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 IPR002347 -
Gma03g01833 273 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 IPR002347 -
Gma03g01833 273 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 2 262 - -
Gma03g01833 273 PRINTS Glucose/ribitol dehydrogenase family signature 9 26 IPR002347 -
Gma03g01833 273 PRINTS Glucose/ribitol dehydrogenase family signature 83 94 IPR002347 -
Gma03g01833 273 PRINTS Glucose/ribitol dehydrogenase family signature 132 148 IPR002347 -
Gma03g01833 273 PRINTS Glucose/ribitol dehydrogenase family signature 158 177 IPR002347 -
Gma03g01833 273 PRINTS Glucose/ribitol dehydrogenase family signature 179 196 IPR002347 -
Gma03g01833 273 PRINTS Glucose/ribitol dehydrogenase family signature 217 237 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01833 Gma-Chr3 44334103 44335080 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01833 5 260 Acyl Lipid Metabolism Gene Families AT3G55290 32.700 2.03e-27 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01833 - - gmx:102668408 499.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01833 03 44334103 44335080 Gma03g01833 03 44334103 44335080 ECH
Gma19g01873 19 47939802 47941301 Gma03g01833 03 44334103 44335080 GST