Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01694 ATGGCTTTCTTTCTCTTTGCTATTTTAATCTTGATGGTCCCTTCTAGTAATGCCTATTGGCCACCTTCACCTGGCTACTGGCCAAGTTCCAAATTCAGGTCCATGAGTTTTTACAAAGGGTTTAGAAACCTCTGGGGCCCTCAGCACCAAAGCCTAGACCAAAATGCATTAACAATCTGGCTTGATAGAACCTCAGGAAGTGGATTCAAGTCAGTAAGGCCATTTCGATCCGGGTACTTTGGTGCTTCCATTAAGGTTCAACCTGGATACACTGCAGGTGTTATAACAGCTTTCTATCTCTCAAACAATGAAGCACATCCCGGTTTCCATGATGAAGTGGACATTGAGTTTCTAGGGACAACATTTGGAAAGCCTTACACTTTGCAGACCAATGTTTACATAAGAGGGAGTGGAGATGGGAGAATCATAGGCAGAGAGATGAAGTTCCATCTCTGGTTTGATCCTACCAAAGATTTTCATCACTATGCTATACTGTGGAGTCCTAAGGAAATAATATTCCTAGTGGATGATGTGCCAATTAGGAGGTACCCGAGGAAGAGTGGTGCAACATTTCCTCTGAGGCCAATGTGGCTATATGGTTCAATATGGGATGCATCATCATGGGCAACTGAGGATGGAAAGTACAAAGCTGATTATAAATACCAACCTTTTGTGGCAAAGTATACCAATTTCAAAGCTAGTGGTTGCTCAGCCTATGCCCCTCGTTGGTGCCATCCAGTTTCAGCCTCACCATATAGGTCTGGTGGGTTGAGTAGGCAACAACATAGTGCCATGAGATGGGTGCAAAGATACCACATGGTTTATAACTATTGTCAAGACCCCAAGAGAGATCACAGCCTAACACCTGAGTGTTGGGGTTGA 882 0.4399 MAFFLFAILILMVPSSNAYWPPSPGYWPSSKFRSMSFYKGFRNLWGPQHQSLDQNALTIWLDRTSGSGFKSVRPFRSGYFGASIKVQPGYTAGVITAFYLSNNEAHPGFHDEVDIEFLGTTFGKPYTLQTNVYIRGSGDGRIIGREMKFHLWFDPTKDFHHYAILWSPKEIIFLVDDVPIRRYPRKSGATFPLRPMWLYGSIWDASSWATEDGKYKADYKYQPFVAKYTNFKASGCSAYAPRWCHPVSASPYRSGGLSRQQHSAMRWVQRYHMVYNYCQDPKRDHSLTPECWG 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01694 293 PIRSF EndGlu_transf 2 293 IPR016455 GO:0010411|GO:0016762|GO:0042546
Gma03g01694 293 Pfam Glycosyl hydrolases family 16 39 220 IPR000757 GO:0004553|GO:0005975
Gma03g01694 293 Gene3D - 17 291 - -
Gma03g01694 293 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 254 291 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Gma03g01694 293 SUPERFAMILY Concanavalin A-like lectins/glucanases 59 279 IPR013320 -
Gma03g01694 293 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 16 228 IPR000757 GO:0004553|GO:0005975
Gma03g01694 293 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 3 292 - -
Gma03g01694 293 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 3 292 IPR044791 GO:0004553
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01694 Gma-Chr3 43120084 43122546 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01694 1 291 Glycoside Hydrolase AT3G44990 64.948 2.32e-143 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01694 K08235 - gmx:100796698 620.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01694 03 43120084 43122546 Gma03g01694 03 43120084 43122546 ECH
Gma19g01745 19 46771607 46774162 Gma03g01694 03 43120084 43122546 GST
Gma03g01694 03 43120084 43122546 Gma10g00497 10 4975682 4977758 PCT
Gma10g00497 10 4975682 4977758 Gma03g01694 03 43120084 43122546 PCT