Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01619 ATGAAGAATGATTTCGCCTTTGTTGAATTTAGTGATCCTCGAGATGCTGATGATGCTAGATACAACCTGGATGGTCGTGATGTTGAAGGAAGTCGTATTATTGTGGAATTTGCCAAGGGGGGTCCTCGTGGTTCCCGGGACCGGGAATATATGGGTCGGGGTCCACCTCCTGGATCTGGGCGATGCTTTAACTGTGGCATTGATGGTCATTGGGCCCGAGATTGCAAAGCCGGGGATTGGAAGAACAAGTGTTACCGTTGTGGGGAAAGAGGTCATATAGAAAAGAACTGTAAGAACAGTCCCAAAAAGTTGAGCCAACGTGGACGGAGTCTTTCACGTTCACCAGTAAGGTCACGTTCTCCTCGTCGTGGAAGAAGCAGGGATCGAAGCTACAGCCGAGACCACAGCTACAGCCGATCGAGATCTCCTGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGCTAGATCACAGAGTCGTGAGCCCTCCAAGATAAGGAAGCATAGTGCATCACCTGACCAAAGCAGCCCACGGAAGAGAGGTGACACATCTCCTGGCAATGATAGGTTGGCCACTCATCAAGATGGGTCTGACTACAGTGATGGTCCTAGAGGGAAAAGTAGAAGCCCTGCTAGCCCTGCAAGGGACCGTGATGAGGGTGGCTATGATAGCCCTAAAGCTAATGGACATAGCCGCAGCCCCAGCCGGAGCCCTAGGGATGATGACAGGAGCCCCATTGATGAAGATGATGACAACCACCGTCGCTCACAGTCACCTTGA 777 0.5135 MKNDFAFVEFSDPRDADDARYNLDGRDVEGSRIIVEFAKGGPRGSRDREYMGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCKNSPKKLSQRGRSLSRSPVRSRSPRRGRSRDRSYSRDHSYSRSRSPVRRERSPVSEARSQSREPSKIRKHSASPDQSSPRKRGDTSPGNDRLATHQDGSDYSDGPRGKSRSPASPARDRDEGGYDSPKANGHSRSPSRSPRDDDRSPIDEDDDNHRRSQSP 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01619 258 MobiDBLite consensus disorder prediction 95 258 - -
Gma03g01619 258 Gene3D - 1 56 IPR012677 -
Gma03g01619 258 MobiDBLite consensus disorder prediction 125 174 - -
Gma03g01619 258 SUPERFAMILY RNA-binding domain, RBD 4 61 IPR035979 GO:0003676
Gma03g01619 258 SUPERFAMILY Retrovirus zinc finger-like domains 52 100 IPR036875 GO:0003676|GO:0008270
Gma03g01619 258 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 1 243 - -
Gma03g01619 258 MobiDBLite consensus disorder prediction 209 224 - -
Gma03g01619 258 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3 33 IPR000504 GO:0003723
Gma03g01619 258 ProSiteProfiles Zinc finger CCHC-type profile. 61 76 IPR001878 GO:0003676|GO:0008270
Gma03g01619 258 ProSiteProfiles Zinc finger CCHC-type profile. 83 99 IPR001878 GO:0003676|GO:0008270
Gma03g01619 258 Gene3D - 57 80 - -
Gma03g01619 258 Gene3D - 81 126 - -
Gma03g01619 258 PANTHER SPLICING FACTOR, PUTATIVE-RELATED 1 243 - -
Gma03g01619 258 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 1 40 IPR000504 GO:0003723
Gma03g01619 258 MobiDBLite consensus disorder prediction 175 192 - -
Gma03g01619 258 SMART c2hcfinal6 61 77 IPR001878 GO:0003676|GO:0008270
Gma03g01619 258 SMART c2hcfinal6 83 99 IPR001878 GO:0003676|GO:0008270
Gma03g01619 258 MobiDBLite consensus disorder prediction 232 258 - -
Gma03g01619 258 Pfam Zinc knuckle 61 76 IPR001878 GO:0003676|GO:0008270
Gma03g01619 258 Pfam Zinc knuckle 82 99 IPR001878 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01619 Gma-Chr3 42375008 42378812 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01619 K12896 - gmx:100813237 446.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01664 19 46009864 46013347 Gma03g01619 03 42375008 42378812 GST