Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01376 ATGCTTAAATTCCTCAACAAGAACCTTCGCCGCCTCAGCTCCCACCTCCGCTGGCCACCACGACATCGTTCCAAGCCCACTCCCAAACCTCCTCCTCCTCCTCCTCCTCCCAAACCAATACGAATCGCAACGTTCAACGCCGCATTCTTCTCCATGGCACCGGTGCTTCCCGAAGCAGACGGAAAAACAACCACCGCCACCACCACCACTTCAGACGACAACAACAACATAGGACGACCACGAAGCATTCTGAAACAGTCCAAGTCTCCGCTGCTGGGGAAGTCGTCGAAGCTGAGAGTGTCCATCAACTTACCCGACAACGAGATTTCGCTGCGCCAAACGAGCTTCTCGGAGCACGAGAGATCGAAATTAGGCTCCTTCGCCGAGGGAAGAATCGAAGAAGGAGGAAAAGAGAGGCAGAGAAGAACGGTGGTTGAAGTTCTGAGAGAGCTAAACGCCGACGTTTTGGGGTTGCAAGACGTGAAAGCGGAGGAAGAGAACGGGATGAAGCCTTTGTCGGATTTGGCGAGTGCTCTGGGAATGAACTACGTCTTCGCTGAAAGCTGGGCTCCTCAATACGGCAACGCCGTTTTGTCTAAGTGGCCCATTAAACGCTGGAAGCTACAGAAAATCTTTGATCACCACGATTACAGGAATGTTCTGAAGGCCACTATCGATGTACCCCAAGAAGGTGAACTCCACTTTTACTGCACCCACCTTGATTATCTTGATGAGAATTGGAGAATGAAGCAGATAAATGCAATAATTCAATCTAATGATGAGCCACACATTTTAGCTGGAGGCCTTAATTCGCTTGATGAAACAGATTATTCCCAAGACAGATGGACAGATATTGTAAAGTACTATGAAGAGATGGGAAAGCCAACACCGAAGGTTGAAGTTATGAAACATCTCAAGAGCAGACACTACACGGATGCTAAGGATTTTTCAGGGGAATGTGAGTCTGTTGTCATGATTGCCAAAGGACAAAGTGTACAAGGGACATGTAAGTATGGAACTAGGGTTGATTACATATTTTCTTCCTCAGATTCTCCATATAAATTCGTTTCTGGATCCTACTTAGTCCTATCTTCCAAAGGGACTTCAGATCATCACATAGTGAAAGTTGAAGTGGTAAAAGTAAATAGTAATCCTCAGGAAAATCTGACAAAGAAGCAGGGGCAACGAAGACAGAAAGTTGTAAGAATAAAATCAACTCCATCGAAATGTATATGGAAAACACACAATGGAGATATAGATTGA 1263 0.46 MLKFLNKNLRRLSSHLRWPPRHRSKPTPKPPPPPPPPKPIRIATFNAAFFSMAPVLPEADGKTTTATTTTSDDNNNIGRPRSILKQSKSPLLGKSSKLRVSINLPDNEISLRQTSFSEHERSKLGSFAEGRIEEGGKERQRRTVVEVLRELNADVLGLQDVKAEEENGMKPLSDLASALGMNYVFAESWAPQYGNAVLSKWPIKRWKLQKIFDHHDYRNVLKATIDVPQEGELHFYCTHLDYLDENWRMKQINAIIQSNDEPHILAGGLNSLDETDYSQDRWTDIVKYYEEMGKPTPKVEVMKHLKSRHYTDAKDFSGECESVVMIAKGQSVQGTCKYGTRVDYIFSSSDSPYKFVSGSYLVLSSKGTSDHHIVKVEVVKVNSNPQENLTKKQGQRRQKVVRIKSTPSKCIWKTHNGDID 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01376 420 SUPERFAMILY DNase I-like 36 378 IPR036691 -
Gma03g01376 420 MobiDBLite consensus disorder prediction 61 81 - -
Gma03g01376 420 MobiDBLite consensus disorder prediction 15 35 - -
Gma03g01376 420 PANTHER ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE, PGAP2-INTERACTING PROTEIN-RELATED 5 413 - -
Gma03g01376 420 Pfam Endonuclease/Exonuclease/phosphatase family 136 371 IPR005135 GO:0003824
Gma03g01376 420 MobiDBLite consensus disorder prediction 58 81 - -
Gma03g01376 420 PANTHER CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR 5 413 - -
Gma03g01376 420 Gene3D Endonuclease/exonuclease/phosphatase 127 380 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01376 Gma-Chr3 39913107 39916235 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01376 - - gmx:100794761 790.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01376 03 39913107 39916235 Gma03g01376 03 39913107 39916235 ECH
Gma19g01444 19 43661565 43664916 Gma03g01376 03 39913107 39916235 GST
Gma03g01376 03 39913107 39916235 Gma10g00226 10 2078135 2082377 PCT
Gma03g01376 03 39913107 39916235 Gma02g01371 02 15883092 15887266 PCT
Gma10g00226 10 2078135 2082377 Gma03g01376 03 39913107 39916235 PCT
Gma02g01371 02 15883092 15887266 Gma03g01376 03 39913107 39916235 PCT