Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01371 ATGATCTCCCCAAGGCAAGACCCTCTTCTGCCCCACACCCACTTCTCCACCATGCTCAAGCTCCTCAACAAGAACCTCCGCCTCCTCCTCCGCCGTCTCCGGTGGCCAATTCGCCGCCGCTCAAAGTCCAAAGTAGTAGTGATCAACAAGCTCGGGAAGAACGCCCTAAAAGCCCAAACCGAAGCAAGCACGAATTTTTCCTCCATGGTTCATCCCAACGCGCAATTGGGTACTCCGAAACCCATTCGGGTCGCGACCTTCAACGCCGCCCTGTTCTCCATGGCACCGGCGCTCCCGAAACCCAAACCCACGTTCGAGGACCAAAACGGGGTCGCTTCGAACCCCGAAAACCTGAATTCGCGATCCAAGTCCACGAAGGAGCGTCCCAGAAGCATACTGAAACAATCGCAATCGCAATCGCAGTCGCAGTCAGTGAAGAACAGAGTAAACGACAGCGACACCAACGTGGGGAGCAGACAAGAGGCGGCGAGGTTGGCGAAATCGAAGATGAGGGTTTCCATAAATTTACCAGACAACGAGATATCGCTGCTGCGAAGCCGACAATCGAGCTTCTCGGAACACGACAAGGCCTCCTCGTGGGTAGGTGGTGGGGCCCACGTGAGTAACAGAACTGTGGTTGAGGTTCTGAAGGAAGTGGACGCTGATGTTTTGGGGCTGCAAGATGTGAAGGCCGAGGAAGAGAATGGGATGAAGCCATTGTCGGATTTGGCGGCGGCGCTGGGAATGAACTACGTGTTCGCGGAAAGCTGGGCACCTGAGTACGGCAACGCTGTCTTGTCCAAATGGCCCATCAAACGCTGGAACTCTCACAAAATCTTTGATCACACTGATTTCAGGAATGTTCTGAAGGCCACTATCGATGTACCACAAGCAGGTGAACTTAACTTCTACTGTACTCACCTTGATCATCTTGATGAGAATTGGCGAATGAAGCAGGTAAATGCAATAATCCAATCTAGTGATGAGCCTCACATCTTAGCTGGAGGACTTAATTCACTTGATGAATCGGATTACTCCCTAGAAAGATGGACAGATATTGTGAAGTACTATAAAGAGATGGGAAAGCCAACACCAAAGGTTGAAGTGATGAAATATCTCAAGAGTAAAGACTACACTGATGCTAAGGACTATGCAGGGGAATGCGAGTCAGTTGTCATGATTGCCAAGGGCCAAAGTGTCCAGGGGACATGTAAGTATGGAACTCGGGTAGACTACATATTATCATCATCAAATTCTCAATACAAGTTTGTTCCCGGTTCCTATTTAGTCCTTTCTTCCAAAGGGACATCAGATCATCACATAGTGAAAGTTGATGTGGTGAAGGCAAATAACAATCCAGAAGAAAATAATGTGACAAAGAATCCGCAACAACCAAGACAGAGAGTTGTAAGAATAACAGAATCCAATCCGTCAAAGGCTATCTGGAAACCATACAATTGA 1461 0.488 MISPRQDPLLPHTHFSTMLKLLNKNLRLLLRRLRWPIRRRSKSKVVVINKLGKNALKAQTEASTNFSSMVHPNAQLGTPKPIRVATFNAALFSMAPALPKPKPTFEDQNGVASNPENLNSRSKSTKERPRSILKQSQSQSQSQSVKNRVNDSDTNVGSRQEAARLAKSKMRVSINLPDNEISLLRSRQSSFSEHDKASSWVGGGAHVSNRTVVEVLKEVDADVLGLQDVKAEEENGMKPLSDLAAALGMNYVFAESWAPEYGNAVLSKWPIKRWNSHKIFDHTDFRNVLKATIDVPQAGELNFYCTHLDHLDENWRMKQVNAIIQSSDEPHILAGGLNSLDESDYSLERWTDIVKYYKEMGKPTPKVEVMKYLKSKDYTDAKDYAGECESVVMIAKGQSVQGTCKYGTRVDYILSSSNSQYKFVPGSYLVLSSKGTSDHHIVKVDVVKANNNPEENNVTKNPQQPRQRVVRITESNPSKAIWKPYN 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01371 486 MobiDBLite consensus disorder prediction 131 161 - -
Gma02g01371 486 Pfam Endonuclease/Exonuclease/phosphatase family 208 439 IPR005135 GO:0003824
Gma02g01371 486 PANTHER CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR 206 483 - -
Gma02g01371 486 PANTHER CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR 18 199 - -
Gma02g01371 486 MobiDBLite consensus disorder prediction 99 164 - -
Gma02g01371 486 Gene3D Endonuclease/exonuclease/phosphatase 199 449 IPR036691 -
Gma02g01371 486 SUPERFAMILY DNase I-like 206 446 IPR036691 -
Gma02g01371 486 PANTHER ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN 18 199 - -
Gma02g01371 486 PANTHER ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN 206 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01371 Gma-Chr2 15883092 15887266 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01371 - - gsj:114390420 924.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g01371 02 15883092 15887266 Gma02g01371 02 15883092 15887266 ECH
Gma10g00226 10 2078135 2082377 Gma02g01371 02 15883092 15887266 GST
Gma19g01444 19 43661565 43664916 Gma02g01371 02 15883092 15887266 PCT
Gma03g01376 03 39913107 39916235 Gma02g01371 02 15883092 15887266 PCT
Gma02g01371 02 15883092 15887266 Gma19g01444 19 43661565 43664916 PCT
Gma02g01371 02 15883092 15887266 Gma03g01376 03 39913107 39916235 PCT