Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01133 ATGATTTTCTCAAAGTCTTGTAGTTTTCTTGGGCTCTACCTCGTTATAGTGGCTTGTCTTGTTTTACAGTGCTGTGCCTATGCAAACCAGACTTCAACAACTCTGGTTGTAGATGCTTCTAAATCTGGAAGGCAAATTCCTGACACACTTTTCGGAATATTCTTTGAGGAGATCAACCATGCCGGTGCTGGTGGATTGTGGGCAGAGCTTGTTAACAACAGAGGTTTTGAAGCTGGGGGCACACAAGTTCCATCAAATATTGCACCTTGGACTATAGTAGGACAAGAATCAGCTATTTTACTACAAACTGAGCTTAGTTCTTGCTTCGAACGCAACAAGGTAGCATTAAGAATGGATGTGCTGTGTGACAATTGCCCTTCTGATGGTGTTGGTGTCTCTAACCCGGGTTTTTGGGGCATGAACATTGTGCAAGGGAATAAATACAAAATTGTCTTCTTTGTTAGATCAGAAGGACCACTTTATATGACGGTATCATTCAGAAAAACTGAAGGTGGAGGGATATTGGCTTCAAGCAATATCGATGCTTCTGAATCAGAAGTTTCAAAATGGAAAAGGATAGAGACTACATTGGTAGCTGATACATCAAGTTCCAATTCATCTTTGTATTTAACAACAACCAAAAAAGGGGTGATATTGCTGGACCAAGTGTCTGCTATGCCTTTGGACACATATAAGGGACATGGTTTTCGAGGTGACTTAGTTAACATGTTATTAGAGTTGAAACCAACCTTTTTCAGATTTCCAGGTGGCTGTTTTGTTGAAGGACAAACATTAAGAAATGCATTTCGGTGGAAAGATAGTGTTGGACCCTGGGAAGAGAGACCTGGTCACTTTGGTGATGTTTGGAGTTATTGGACAGATGAAGGATTTGGTTATTTTGAGGGTCTTCAACTAGCAGAGGACATTGGTGCAAGGCCATTGTGGGTATTTAACAACGGCATCAGCCATACTGATCAAGTAGATACAAGCGTCATCACACCTTTTGTGAAAGAAGCCCTTGATGGTATTGAGTTTGCCAGAGGAAACTACCTAGCTTTCTACGAGGCAATACGACATGCTTATCCGGATATTCAAATGATTTCAAATTGTGATGCTTCGTCTAAACCGTTAGATCACCCAGCTGATATGTATGATTATCACACTTATCCTCATGAAGCTATAAAAATGTTTAATAACGCTCATGTGTTTGATAAGACACCACGAAACGGTCCAAAGGCTTTTGTGAGTGAATATGCTCTAATTGGAGACATACAAGCTAAGCATGGAACCCTTTTGGGAGCTGTGTCCGAAGCTGGATTCCTTATTGGATTAGAAAGAAACAGTGATCATGTGATAATGGCTAGCTATGCGCCACTTTTTGTAAATGCAAATGACAGGATGTGGAGCCCAGCTGCAATTGTTTTTAATTCCAATCAGGTTTATGGAACTCCCAGCTATTGGGTGCAGTTTATGTTTAGAGAGTCAAATGGAGCAACATTTTTAAAATCACAACTTCAAACGCCTGACCCTGATTCAGTTGCTGCATCTGCAATTCTTTGGAAAAATCTCCAAGATAAAAAAACTTACTTAAAAATAAAGGTTGCAAACGTGGGGAGCAACCAAATAAATTTCAAGATTTCTCTAAACGGATTTGAGAGCTCAAATGCAACTAAGGCAACAAAGACAGTGCTCACATCTAAGAATGCATTAGATGAGAATAGCCTCGCAAACCCAACAAATATAGTACCAAAGCGAAGTCCACTTCAGAGTGCTAACAACGAGATAAATGACATACTTCCTCCAGTTTCATTGACGGTATTTGATTTATTAAAAAATGAATGA 1842 0.3985 MIFSKSCSFLGLYLVIVACLVLQCCAYANQTSTTLVVDASKSGRQIPDTLFGIFFEEINHAGAGGLWAELVNNRGFEAGGTQVPSNIAPWTIVGQESAILLQTELSSCFERNKVALRMDVLCDNCPSDGVGVSNPGFWGMNIVQGNKYKIVFFVRSEGPLYMTVSFRKTEGGGILASSNIDASESEVSKWKRIETTLVADTSSSNSSLYLTTTKKGVILLDQVSAMPLDTYKGHGFRGDLVNMLLELKPTFFRFPGGCFVEGQTLRNAFRWKDSVGPWEERPGHFGDVWSYWTDEGFGYFEGLQLAEDIGARPLWVFNNGISHTDQVDTSVITPFVKEALDGIEFARGNYLAFYEAIRHAYPDIQMISNCDASSKPLDHPADMYDYHTYPHEAIKMFNNAHVFDKTPRNGPKAFVSEYALIGDIQAKHGTLLGAVSEAGFLIGLERNSDHVIMASYAPLFVNANDRMWSPAAIVFNSNQVYGTPSYWVQFMFRESNGATFLKSQLQTPDPDSVAASAILWKNLQDKKTYLKIKVANVGSNQINFKISLNGFESSNATKATKTVLTSKNALDENSLANPTNIVPKRSPLQSANNEINDILPPVSLTVFDLLKNE 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01133 613 PANTHER ALPHA-L-ARABINOFURANOSIDASE-LIKE PROTEIN 348 611 - -
Gma03g01133 613 Gene3D - 493 610 IPR013780 -
Gma03g01133 613 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 348 611 - -
Gma03g01133 613 Gene3D - 67 222 - -
Gma03g01133 613 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Gma03g01133 613 SUPERFAMILY (Trans)glycosidases 205 500 IPR017853 -
Gma03g01133 613 Pfam Alpha-L-arabinofuranosidase C-terminal domain 417 603 IPR010720 GO:0046373|GO:0046556
Gma03g01133 613 SMART alpha_l_af_c 416 603 IPR010720 GO:0046373|GO:0046556
Gma03g01133 613 SUPERFAMILY Glycosyl hydrolase domain 483 608 - -
Gma03g01133 613 PANTHER ALPHA-L-ARABINOFURANOSIDASE-LIKE PROTEIN 1 348 - -
Gma03g01133 613 Gene3D Glycosidases 223 349 - -
Gma03g01133 613 Gene3D Glycosidases 350 492 - -
Gma03g01133 613 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 1 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01133 Gma-Chr3 36573570 36579907 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01133 12 611 Glycoside Hydrolase AT3G10740 56.327 0.0 723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01133 K01209 - gmx:100780771 1224.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01196 19 40654104 40658010 Gma03g01133 03 36573570 36579907 GST