Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00523 ATGAGTTTTGGGATTTTTCGACCACGAATGCAAGGCTCAGTTTTTCATGACTTGGATTTCCCCCCTGCAAGTTTATTTGGAGGGAGAGAATTGCTTCCTGTGGAAAGCATTTTCAAGAACCATCCTAAGGCATGTCTGACAATTCTATCAAGAACTTTGGACACCAAGCATGGCTACAGGATCCTGAAACCACTGCTTGATCGTAGGTTCAAAGTGCAGGCAATGGCCCCAGACTTGCCATTTTTGGTCAAGGGGACTCCGGTCGAAGCTTGGTTTCGTGAGCTAAGGAAGGGTAGAAAGGACCCCAGTGAGATTCCTTTGTCTCAGAATCTATCTAATCTGATAAGACTTGCAGTTCTGTACAAATATGGTGGTGTCTACATAGATACATACTTTATACTTTATAGTTCTAAAACCCTTTCTAACAGGGTTAAAGAATTCTATTGGGGCGCAGAGCATGAATTCAGATTCATCAATGAATTTGCCTTGACTTTCAATGGAAACAAATGGGGGAATAATGGTCCCTACCTGGTTTCCAGAGTGATTAAGAGGCTGTTTAAAAGACATGATTTCAACTTTACAATCTTGCCGCCTATGGCCTTTTATCCAGTGGATTGGAACAAGATAAGTGGGTTCTTTACAAAACTGAAAACTCAGGGAAGAATCAAGACGGGTAGAAGCCAACCTGCTTCAGCTCAGTGGGAAGACTTATGGGATTCATCTATGGAATAA 732 0.4208 MSFGIFRPRMQGSVFHDLDFPPASLFGGRELLPVESIFKNHPKACLTILSRTLDTKHGYRILKPLLDRRFKVQAMAPDLPFLVKGTPVEAWFRELRKGRKDPSEIPLSQNLSNLIRLAVLYKYGGVYIDTYFILYSSKTLSNRVKEFYWGAEHEFRFINEFALTFNGNKWGNNGPYLVSRVIKRLFKRHDFNFTILPPMAFYPVDWNKISGFFTKLKTQGRIKTGRSQPASAQWEDLWDSSME 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00523 243 Gene3D - 68 196 - -
Gma03g00523 243 PANTHER ALPHA 1,4-GLYCOSYLTRANSFERASE FAMILY PROTEIN 22 140 IPR044789 -
Gma03g00523 243 PANTHER ALPHA 1,4-GLYCOSYLTRANSFERASE FAMILY PROTEIN 155 221 IPR044789 -
Gma03g00523 243 SUPERFAMILY Nucleotide-diphospho-sugar transferases 60 211 IPR029044 -
Gma03g00523 243 Pfam Glycosyltransferase sugar-binding region containing DXD motif 32 138 IPR007577 -
Gma03g00523 243 PANTHER ALPHA 1,4-GLYCOSYLTRANSFERASE FAMILY PROTEIN 22 140 - -
Gma03g00523 243 PANTHER ALPHA 1,4-GLYCOSYLTRANSFERASE FAMILY PROTEIN 155 221 - -
Gma03g00523 243 Pfam Alpha 1,4-glycosyltransferase conserved region 156 217 IPR007652 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00523 Gma-Chr3 10151544 10152901 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00523 20 219 Glycosyltransferase AT3G09020 49.545 6.04e-68 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00523 K01988 - gmx:100781975 319.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00523 03 10151544 10152901 Gma03g00523 03 10151544 10152901 ECH
Gma03g00523 03 10151544 10152901 Gma01g01163 01 41312447 41313688 GST
Gma18g01826 18 50670416 50671567 Gma03g00523 03 10151544 10152901 PCT
Gma07g01361 07 18080799 18081998 Gma03g00523 03 10151544 10152901 PCT
Gma03g00523 03 10151544 10152901 Gma18g01826 18 50670416 50671567 PCT
Gma03g00523 03 10151544 10152901 Gma07g01361 07 18080799 18081998 PCT