Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01163 ATGTTTGTTCATCGGCTGCTTAAACATGCCAAGTTATCTGCCCTCCCTCTAATCACTTTCTCTGCCATAATTTTTCATATCTATGCAGATGGTATTGTCTACCATGATTCCCTACACTCTGCTGCTAATACCGAAGCTCCAGAGAAGTTAGAAGTTCACAATCACAGAACAAAAGGAATAGGGTCAACCCTTGTTCACATACCTTTACATTCCATTCAAGAGAAGGATGAAGCCAACAGTCGAAACCAGAAGGCTCTAGTTGCCCCATTCAATGCCACAGAAGAAGAAAGAATAGCATGGCTTCAAGGACAGCTGCATAACTTCAAGATCTTCAAGTCGAACAACTTGACCCGACAATTTAATGCTCGAGTTTTGGGATTTTTAGGCCGCAAATGCGAGGTTCAGTTTTTCATGACTTGGATTTCACCTGCAAGTTTATTTGGAGGGAGAGAATTGCTGTCTGTGGAAAGCATTTTCAAGAACCATCCCAAGGCATGTCTGATAATTCTATCAAGAACTTTGGACAGCAGACATGGCTACAGGATCCTGAAACCACTGCTTGATCGTGGGTTCAAAGTGCAGGCAACAGCCCCGGACTTGTCATTTTTGGTCAAGGGGACTCCAGTTGAAGCTTGGTTTCGTGAGCTAAGGAAGGGTAGAAAGGACCCCGGGTTAAGAAATTCTATTGGTGCGCAGAGCATGAATTTGGATTCTAAGCACTGGACCAGATTAAATAATGCAGTTCTGATTTTTGATATTGGACATCAACTTCTGCATAGATTCATCAATGAATTTGCATTAACTTTTGATGGAAACAAATGGGGACATAATGGTCCCTACCTGGTTTCCAGAGTGATTAAGAGGCTGGGGAAAAGACATGATTTCAACTTTACAGTCTTGCCACCTATGGCCTTTTATCCGGTGGACTGGAACAAGATAAATGGGCTTTTTATGAAGCCGAAAACTCAGGAAGAATCAAAATGGGTAGAAGCCAAACTGCTTCAGCTCAGAAGAAAGACTTATGGGATTCATCTATGGAACAAACATAGTAGCAGATTGACAATTGAAGAAGGAAGTATCATGGGAAGACTTGCATCAGATTATTGTGTCATTTGTAACAAATGGGTATAG 1131 0.4173 MFVHRLLKHAKLSALPLITFSAIIFHIYADGIVYHDSLHSAANTEAPEKLEVHNHRTKGIGSTLVHIPLHSIQEKDEANSRNQKALVAPFNATEEERIAWLQGQLHNFKIFKSNNLTRQFNARVLGFLGRKCEVQFFMTWISPASLFGGRELLSVESIFKNHPKACLIILSRTLDSRHGYRILKPLLDRGFKVQATAPDLSFLVKGTPVEAWFRELRKGRKDPGLRNSIGAQSMNLDSKHWTRLNNAVLIFDIGHQLLHRFINEFALTFDGNKWGHNGPYLVSRVIKRLGKRHDFNFTVLPPMAFYPVDWNKINGLFMKPKTQEESKWVEAKLLQLRRKTYGIHLWNKHSSRLTIEEGSIMGRLASDYCVICNKWV 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01163 376 SUPERFAMILY Nucleotide-diphospho-sugar transferases 110 374 IPR029044 -
Gma01g01163 376 Pfam Alpha 1,4-glycosyltransferase conserved region 251 374 IPR007652 -
Gma01g01163 376 PANTHER ALPHA 1,4-GLYCOSYLTRANSFERASE FAMILY PROTEIN 2 224 IPR044789 -
Gma01g01163 376 PANTHER ALPHA 1,4-GLYCOSYLTRANSFERASE FAMILY PROTEIN 224 374 IPR044789 -
Gma01g01163 376 PANTHER ALPHA 1,4-GLYCOSYLTRANSFERASE FAMILY PROTEIN 2 224 - -
Gma01g01163 376 PANTHER ALPHA 1,4-GLYCOSYLTRANSFERASE FAMILY PROTEIN 224 374 - -
Gma01g01163 376 Pfam Glycosyltransferase sugar-binding region containing DXD motif 150 218 IPR007577 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01163 Gma-Chr1 41312447 41313688 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01163 1 376 Glycosyltransferase AT3G09020 40.338 8.31e-106 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01163 K01988 - gmx:100781975 753.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01163 01 41312447 41313688 Gma01g01163 01 41312447 41313688 ECH
Gma03g00523 03 10151544 10152901 Gma01g01163 01 41312447 41313688 GST
Gma18g01826 18 50670416 50671567 Gma01g01163 01 41312447 41313688 PCT
Gma07g01361 07 18080799 18081998 Gma01g01163 01 41312447 41313688 PCT
Gma01g01163 01 41312447 41313688 Gma18g01826 18 50670416 50671567 PCT
Gma01g01163 01 41312447 41313688 Gma07g01361 07 18080799 18081998 PCT