Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00519 ATGATGAAAGCCCTCACAAGCTCTTGTTCTAAGGCCATGGTCGAGACTCTAGGACCCTTCTCTCCCAGAGTTCCCCTTTGTGTTTCTGATAGACCCGAATTCTGCTTCACCCTTCGTTCCAAAAATGAGAAAAAGGGATGGAATTTATTGCTCCTGAAACTGGTTCGAAACAATGATCTTTACCCTGTTCATGCAGTGCCACCAAAGGACCAGGTGGACTTGGAGACTGTGGAGCCTCAGGCTCAACAAAGTGAACAAACAAATGAATCAAAGTTTGTTCATGTATCGTTCCAGTTAGAAAAGAGTTGTAATTTTGGTGAACAGTTTCTTATAGTTGGAGGTGATCCTGTGCTTGGTTCATGGGACCCTTTAGAGGCATTACCCATGACATGGTCTGAAGGACATGTATGGGCTGTGGAGCTGGATATGCCTGCTGGACAAACATTCCAGTATAAGTTCATACTGGAAGGAGAAGGGGGGGATATTATTTGGCAGCCAGGGTCGGATCGATTGATCCACACTTGGGAAACTAAGAATAGAATAGTTGTTCTCGAAGATTGGGAGAATGTAGAACTTCAGAAAATAACAGAGGAAGATCAACTTGCCGAGCCAAATGAGGAACCCCAGGTTGACTTTGAAGTGCCAACTTTAGCTGAATTTCTTAATAATCCTCAAGAAGAACTGGATTCCAAAGCATCGGAAATATCGTCTGTAGAAGATACCCAAATTCAGTCTGTGGAGGAACCACTTGCTGAAACAGTTCGGCAACAAATCACTGAGGAAGATCAACTTGCCGAGCCAAATGAGGAACCCCAAGTTGACTTTGAAGTGCCAACTTTAGCTGAATTTCTTAATAATCCTCAAGAAGAACTGGATTCCAAAGCATTGGAAATATCATCTGTAGAAGATACCCAAATTCATGCTGTGGAGGAACCACTTGCTGAAACAGTCCGGCAACAAATCACTGGTAATAGTATTTCTTCCTCAATGGAAAAGCCAATGTCTATTGTTGTAGAAAACATAAGTTCTTCGGGGGATCTCATCAGCAGTATAAGCCACAAAAGTAATAAAAAGAGTATACTTCAACCAAGTGAAGAATCTGCAGATAGTCCAGGAAATGATGATATAATACATGATCTTGGTCAAAATGGAAATCCTGCATCACTGGAGAACCAGGAAAAGACAATTGTGGAAAGCAGCTTATTTGATCTTGAAGAAGGTCCTGTTCTTGTACCTGGCTTACCAATACCACCAACTGAGCCAACTGATGAAGCAGACCAAGGTGAAGTTCAAGAAACGACTAAAAAGGACACTTCAGTTGAAGCTTTTGAAACTCAGGATCAGAACATAGCTAAGTTCAGTAAGGAGGAAGAAACTGATGATGCCATACCCCAAGAGATAAATGCAACCATCAATAATGGACCAGAGCTGCTTTACAATAAACAACATGAAGAGTCTCATTTGTCCCCAGAAATGGAAGACTGGCCAAACTACGAGCCAGATGATGACAATACCGTGCAAAATGACATCAAATGGGGCCAAGACACGGTAAACAAGTTTCTAACAAAACTTGGATTCTTTTGA 1584 0.4186 MMKALTSSCSKAMVETLGPFSPRVPLCVSDRPEFCFTLRSKNEKKGWNLLLLKLVRNNDLYPVHAVPPKDQVDLETVEPQAQQSEQTNESKFVHVSFQLEKSCNFGEQFLIVGGDPVLGSWDPLEALPMTWSEGHVWAVELDMPAGQTFQYKFILEGEGGDIIWQPGSDRLIHTWETKNRIVVLEDWENVELQKITEEDQLAEPNEEPQVDFEVPTLAEFLNNPQEELDSKASEISSVEDTQIQSVEEPLAETVRQQITEEDQLAEPNEEPQVDFEVPTLAEFLNNPQEELDSKALEISSVEDTQIHAVEEPLAETVRQQITGNSISSSMEKPMSIVVENISSSGDLISSISHKSNKKSILQPSEESADSPGNDDIIHDLGQNGNPASLENQEKTIVESSLFDLEEGPVLVPGLPIPPTEPTDEADQGEVQETTKKDTSVEAFETQDQNIAKFSKEEETDDAIPQEINATINNGPELLYNKQHEESHLSPEMEDWPNYEPDDDNTVQNDIKWGQDTVNKFLTKLGFF 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00519 527 Gene3D Immunoglobulins 90 188 IPR013783 -
Gma03g00519 527 MobiDBLite consensus disorder prediction 407 437 - -
Gma03g00519 527 MobiDBLite consensus disorder prediction 353 369 - -
Gma03g00519 527 PANTHER BLR6771 PROTEIN 1 261 - -
Gma03g00519 527 PANTHER BLR6771 PROTEIN 256 477 - -
Gma03g00519 527 CDD CBM20 95 187 - -
Gma03g00519 527 ProSiteProfiles CBM20 (carbohydrate binding type-20) domain profile. 87 189 IPR002044 GO:2001070
Gma03g00519 527 SUPERFAMILY Starch-binding domain-like 90 186 IPR013784 GO:0030246
Gma03g00519 527 MobiDBLite consensus disorder prediction 353 388 - -
Gma03g00519 527 Pfam Starch binding domain 93 179 IPR002044 GO:2001070
Gma03g00519 527 SMART CBM_20_2 92 184 IPR002044 GO:2001070
Gma03g00519 527 MobiDBLite consensus disorder prediction 483 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00519 Gma-Chr3 10045294 10049545 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00519 - - gmx:100780774 1025
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00519 03 10045294 10049545 Gma01g01164 01 41380180 41383070 GST
Gma18g01831 18 50807685 50808818 Gma03g00519 03 10045294 10049545 PCT
Gma07g01366 07 18123156 18124175 Gma03g00519 03 10045294 10049545 PCT
Gma03g00519 03 10045294 10049545 Gma18g01831 18 50807685 50808818 PCT
Gma03g00519 03 10045294 10049545 Gma07g01366 07 18123156 18124175 PCT