Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01164 ATGAAAGCCCTCACAAGCTCTTGTTCCAAGACCGTCGTCGACACCCTAGGACCCTTTTCTCCCAGAGTTTGCCTTCGTGTTTCTTATAGACCCGAATTCTGCTTCACCCTTCGTTCCAAAAATGAGAAAAAGGGTTGCAATTCATTGCTCCTGAAACTGGTTCGGAACAAGGGTGTTGTTTACCCGGTTCATGCAGTGCCACCAAAGAACCAGGTGGACTTGGATACTGCGGAGCCTCAAGCTCAACAAAGTGAACAAACAAATGAATCAAAGTTTGTTCGTGTATCTTTTCAGTTAGAAAAGAATTGTAACTTCGGTGAACAGTTTCTTATCGTTGGAGATGATCCTGTGCTTGGTTCATGGGACCCTTTAGAAGCATTACCCATGACATGGTTTGAAGGACATGTATGGGCCGTGGAGCTGGATATGCCTGCTGGAAAGTCATTCCAGTTCAAGTTCATACTGAAAGGAAAAGGGGGGGATATTATTTGGCAGCCAGGGTTGGATCGAATGATCCACACTTGGGAAACTATGAACAGAATAATTGTTCTTGAAGATTGGGAGAATGCAGAACTTCAGAAAATAATAGAGGAAGATCAACTTGCTGAGCCAAATGAGGAACCCCAGGTCGACTTAGAAGTGCCGACTTTAGCTGAAACTTTGGAGAATCCTCAAGAGGAACTGGATTCCAATGCATCCGAAATATCAGCTGTTGAAGATACCCAAATTCATGCAGAGGAGAAACCACTTGCTGAACCAGTCATGCAACAAAACACTGATACTATTTCTTCCTCTATCGAAAAGCCAATGGCTATTGTTGCAGAAAATATAAGTTCTTCGGAAGATCTCATCAACAGTACAAGCCATAAAAGTAATAAAAAGAATATAATACTTCAACCAAAAGAAGAATCTGCAGATAGTCCAGGAAACGATGATATAATACATGATCTTGGACACAATGGAAATGCTGCGTCACTCGAAAATCAGGAAAAGACAATTGTGGAAAGCAGCTTATTTGATCTTGAAGGAGGTCCTGTTCTTGTACCTGGCTTAATAATAGAACCAACTGAGCCAACTGATCAAGCGGGTCAAAGTGAAGTTCAAGAGATGACTAACACGGACACTTCAGTTGGAGCTTTTGAAACTCAGGATCAGAACATACCCGAGGTAAACGCTTGA 1179 0.4224 MKALTSSCSKTVVDTLGPFSPRVCLRVSYRPEFCFTLRSKNEKKGCNSLLLKLVRNKGVVYPVHAVPPKNQVDLDTAEPQAQQSEQTNESKFVRVSFQLEKNCNFGEQFLIVGDDPVLGSWDPLEALPMTWFEGHVWAVELDMPAGKSFQFKFILKGKGGDIIWQPGLDRMIHTWETMNRIIVLEDWENAELQKIIEEDQLAEPNEEPQVDLEVPTLAETLENPQEELDSNASEISAVEDTQIHAEEKPLAEPVMQQNTDTISSSIEKPMAIVAENISSSEDLINSTSHKSNKKNIILQPKEESADSPGNDDIIHDLGHNGNAASLENQEKTIVESSLFDLEGGPVLVPGLIIEPTEPTDQAGQSEVQEMTNTDTSVGAFETQDQNIPEVNA 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01164 392 MobiDBLite consensus disorder prediction 356 392 - -
Gma01g01164 392 SUPERFAMILY Starch-binding domain-like 90 185 IPR013784 GO:0030246
Gma01g01164 392 MobiDBLite consensus disorder prediction 75 89 - -
Gma01g01164 392 MobiDBLite consensus disorder prediction 358 392 - -
Gma01g01164 392 ProSiteProfiles CBM20 (carbohydrate binding type-20) domain profile. 87 189 IPR002044 GO:2001070
Gma01g01164 392 Pfam Starch binding domain 93 178 IPR002044 GO:2001070
Gma01g01164 392 PANTHER BLR6771 PROTEIN 1 388 - -
Gma01g01164 392 SMART CBM_20_2 92 184 IPR002044 GO:2001070
Gma01g01164 392 MobiDBLite consensus disorder prediction 70 89 - -
Gma01g01164 392 CDD CBM20 94 187 - -
Gma01g01164 392 Gene3D Immunoglobulins 90 188 IPR013783 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01164 Gma-Chr1 41380180 41383070 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01164 - - gmx:100784126 778.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01164 01 41380180 41383070 Gma01g01164 01 41380180 41383070 ECH
Gma03g00519 03 10045294 10049545 Gma01g01164 01 41380180 41383070 GST
Gma18g01831 18 50807685 50808818 Gma01g01164 01 41380180 41383070 PCT
Gma07g01366 07 18123156 18124175 Gma01g01164 01 41380180 41383070 PCT
Gma01g01164 01 41380180 41383070 Gma18g01831 18 50807685 50808818 PCT
Gma01g01164 01 41380180 41383070 Gma07g01366 07 18123156 18124175 PCT