Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00023 ATGGACACAACACACACAAACAGTGAATATGAAGATTGGAAGAGCATTGATATAGCAGATTCTATCTTAAGTTATGGAAGTGAATTGGGAGACATGGAAGAAAATGAATGGCAGATGGTGCAAACGAAAGGAAACCAATTTGTGGTGAACGACCAACCTTTCTATGTTAATGGATTCAACACATACTGGTTGATGGTATTTGCTGCGGATGAGTCCACAAGAGGGAAGGTCACTGAGGTGTTCAAACATGCATCCTCTGTGGGTATGTCAGTTTGTAGGACTTGGGCCTTCAATGATGGCCAATGGCGTGCTCTTCAGAAATCTCCATCAGTTTATGATGAAGACGTATTCAAGGCCTTGGACTTTGTGGTAAGTGAAGCAAGGAAATACAAAATCAGGCTCATATTATCACTGGTTAACAACTGGGAGGCTTATGGTGGCAAACCACAGTATGTGAAGTGGGGCAATGCAGCTGGCCTTAACTTGACCTCTGATGATGACTTCTTTTCACATCCAACTCTCAGAAGCTACTACAAGGCTCATGTTAAGACGGTGCTCAATAGAGTTAATACATTCACAAATATCACTTACAAGGAAGATCCAACAATTTTTGCTTGGGAACTGATGAATGAGCCTCGATGCACCTCAGACTCCTCAGGTGATGTGTTACAGGATTGGATAAAAGAAATGGCATTCTATGTGAAGAGCATTGATCCAAAACACCTAGTGGAGATTGGACTAGAAGGATTTTATGGCCCCTCAACACCTCAGAAATATCAGTTCAACCCAAATTCATATGCTCATGAGGTTGGAACTGATTTTATCAGGAACCACCAGGTTCTAGGTGTTGACTTCGCTTCTGTTCACATATATCCAGACTCTTGGATTTCACAATCAGTTGCAGATTCCCATCTCCCATTCATAAAGACTTGGATGGAAGCCCACATAGAGGATGCTGAAAAGTATCTTGGAATGCCCGTTGTTTTTGCTGAGTTTGGTGTATCTGCAAAAGCTCCTGGCTACAATTCAACATATAGAGACAACCTTATAAACACTGTGTACAAGACCATCCTGAACTCTACAAAGAAAGGAGGTAGTGGGGCTGGAAGCCTTGTGTGGCAGCTCTTTCCTGACGGAACGGATTACATGGATGATGGCTATGCAATTGTTCTCTCAAAGTCACCTTCCACGTCAAGCATTATATCCCTTCAATCCACAAGGCTAGCCCTCTTCAATTCCCTGTGTTCTAAGAAATGCCGTTGGGGTTGTAAGAAAAGAAATGTGTTGGAAAAAGTACTCTATCATGACGAACTGTAA 1317 0.4229 MDTTHTNSEYEDWKSIDIADSILSYGSELGDMEENEWQMVQTKGNQFVVNDQPFYVNGFNTYWLMVFAADESTRGKVTEVFKHASSVGMSVCRTWAFNDGQWRALQKSPSVYDEDVFKALDFVVSEARKYKIRLILSLVNNWEAYGGKPQYVKWGNAAGLNLTSDDDFFSHPTLRSYYKAHVKTVLNRVNTFTNITYKEDPTIFAWELMNEPRCTSDSSGDVLQDWIKEMAFYVKSIDPKHLVEIGLEGFYGPSTPQKYQFNPNSYAHEVGTDFIRNHQVLGVDFASVHIYPDSWISQSVADSHLPFIKTWMEAHIEDAEKYLGMPVVFAEFGVSAKAPGYNSTYRDNLINTVYKTILNSTKKGGSGAGSLVWQLFPDGTDYMDDGYAIVLSKSPSTSSIISLQSTRLALFNSLCSKKCRWGCKKRNVLEKVLYHDEL 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00023 438 Pfam Cellulase (glycosyl hydrolase family 5) 51 353 IPR001547 GO:0004553|GO:0071704
Gma03g00023 438 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE 17 438 - -
Gma03g00023 438 SUPERFAMILY (Trans)glycosidases 40 397 IPR017853 -
Gma03g00023 438 PANTHER - 17 438 IPR045053 GO:0004553
Gma03g00023 438 Gene3D Glycosidases 37 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00023 Gma-Chr3 301537 305083 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00023 34 438 Glycoside Hydrolase AT5G01930 74.693 0.0 669
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00023 K19355 - gmx:100801139 899.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01997 18 53260030 53262606 Gma03g00023 03 301537 305083 PCT
Gma03g00023 03 301537 305083 Gma18g01997 18 53260030 53262606 PCT