Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02768 ATGGAACTCTGTACTCGAACCTTCACAAGTTTCCTTCTTTTCAATCCTTCTTTCTCTCCAAACTCTGTTTTTCTTCGTGCTAATCCCAACGCTACAACACCCTTAAAATTCAATTCCCTTAAACTCTCATCGTTTTCGCCTCATGTTCACCTCTTTCAACCCTTTCTCTCTCCTCACATTTCTTCTCCCTTCACACTCTCAGCTGCTGCTTCTGCTTCTTCTTCTTCAGTTGCAGTTGGCACTGAACAGGACCGTCTTCCAGCAGAATTGAAGGTTACTGAAACAGAGGAACCCAAGTCCAGAgttagattgcatgtggaggtgccatcattggtatgtgaggattgttacaaaagggtcataacagagtttatgaagcaagcaaagatccctggatttcgccctggaaagaaagttccagaaaacattcttattagttatgttgggagtcaaaatgttcagaaggctactattgaatctatattaaggaggacactctcgcatgctatgacatcagttactggaagggctttgcaggactcagtacaaatagtgactaagttttctgagatggaggagacatattcttctcttgggtctcttagatatgatgtccttgttgatattgcaccagaaatcaaatggattcccgataataatgcatacaaaaatttaaagattgttgttgagatagatagcgatatagatgctcacagagcatctgaacaagaatttagaaggcgttataaatccattggtgcactgaaagtggttattgacagagggctacaggttggagatgttgctgtccttgacatctcagcaacaaccattgatcaagatgaatcaaatgttaaaagtattccttctgctgaaagtaaaggctttaattttgatacagaatatggtgaacaagtattaccgggtttccttgattctataattggaattcaacgaggtgaatcaaagtcttttcctcttgtatttcctgaaacatggaagcaagaaaatcttcgtggtgttcatgctcagtttactGTTGAATGCAAAGAACTTTTTTACAGAGATTTACCAGAGCTGAATGATTCTATTGCTGATAAGCTTCTTCCTGAATGCACCACAGTGGAGCAGGTCAAAGACTTATTGTTACAGAAATGCCTAGAGGTGGAGCAAACAGCTAGAGAACAAGCAACTGATAATGCTATCTTAGATCAGATTTCTAAGATTGTAGAAGTTGATATACCTAAATCCTTGTTTGAGGAACAAGGAAGGCAGCTTTATGGAGCCAACCTATTAGAAATACAGGCAAAAATGAAACTAAATGAGCAGCAGCTGGCGACTCTGTCAAGTTCGAAGGCTGTGAACGAATTTCTTGAGCATCAGAAGGAAAATATAACAAATTTGATAAAACAGAGTCTGGCAGTTGGTGATATTTATAAGCGTGAAAATCTGCAGTTTGTTACTGAGGACCTTGTCAAAGAGGTTGAGAATTCCATTGCTGAATTCAAACGTCAAAACCAAGAATATGATGAGGAACGGGTGAAGGGACAGGTTCAAGAAATACTAGAAGGAGCTAAAGTGCTTGAATGGTTGAGAGAACATGCAGAGGTTCAGTATGTAACTAAATGA 1629 0.2222 MELCTRTFTSFLLFNPSFSPNSVFLRANPNATTPLKFNSLKLSSFSPHVHLFQPFLSPHISSPFTLSAAASASSSSVAVGTEQDRLPAELKVTETEEPKSRVRLHVEVPSLVCEDCYKRVITEFMKQAKIPGFRPGKKVPENILISYVGSQNVQKATIESILRRTLSHAMTSVTGRALQDSVQIVTKFSEMEETYSSLGSLRYDVLVDIAPEIKWIPDNNAYKNLKIVVEIDSDIDAHRASEQEFRRRYKSIGALKVVIDRGLQVGDVAVLDISATTIDQDESNVKSIPSAESKGFNFDTEYGEQVLPGFLDSIIGIQRGESKSFPLVFPETWKQENLRGVHAQFTVECKELFYRDLPELNDSIADKLLPECTTVEQVKDLLLQKCLEVEQTAREQATDNAILDQISKIVEVDIPKSLFEEQGRQLYGANLLEIQAKMKLNEQQLATLSSSKAVNEFLEHQKENITNLIKQSLAVGDIYKRENLQFVTEDLVKEVENSIAEFKRQNQEYDEERVKGQVQEILEGAKVLEWLREHAEVQYVTK 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02768 542 Hamap Trigger factor [tig]. 90 538 IPR005215 GO:0015031
Gma02g02768 542 Pfam Bacterial trigger factor protein (TF) C-terminus 374 531 IPR008880 GO:0006457|GO:0015031
Gma02g02768 542 Gene3D - 222 537 IPR037041 GO:0006457|GO:0015031
Gma02g02768 542 Gene3D - 251 358 IPR046357 GO:0003755
Gma02g02768 542 SUPERFAMILY Triger factor/SurA peptide-binding domain-like 360 540 IPR027304 -
Gma02g02768 542 PANTHER TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE 74 541 IPR005215 GO:0015031
Gma02g02768 542 Coils Coil 492 512 - -
Gma02g02768 542 Gene3D - 88 213 IPR036611 GO:0006457|GO:0015031
Gma02g02768 542 SUPERFAMILY FKBP-like 258 361 - -
Gma02g02768 542 Pfam Bacterial trigger factor protein (TF) 91 230 IPR008881 GO:0006457|GO:0015031
Gma02g02768 542 PANTHER TRIGGER FACTOR-LIKE PROTEIN TIG, CHLOROPLASTIC 74 541 - -
Gma02g02768 542 SUPERFAMILY Trigger factor ribosome-binding domain 90 217 IPR036611 GO:0006457|GO:0015031
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02768 Gma-Chr2 53295351 53301360 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02768 K03545 - gmx:100805543 1033.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02768 02 53295351 53301360 Gma02g02768 02 53295351 53301360 ECH
Gma14g00172 14 1385134 1391228 Gma02g02768 02 53295351 53301360 GST