Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01293 ATGGCAACCATCTCTGCTGCTATCACAACCCCATCGATCTCCCGCGCAACTCTTGTGCAAAAGCGGGTCTCATCTCCCGTTCTTGGTTTGCCAGCAATGGGTAAGGTGGGAAGAGTGAGTTGCTCCATGGAGGAAAAACCTTATTCTGTGAAGGAAAGCAGCTCTAGCATGTTGGGGATGGGGGCATCTCTGATGGCAGCTGCCAGCGCTGCAGCCATGTCAGGCCCAGCCATGGCCTTGGTAGATGAGAGACTGAGCACTGAAGGAACCGGACTTCCCTTTGGCCTCAGCAACAATCTTCTTGGTTGGATCCTTTTCGGCGTCTTTGGTCTTATCTGGACTCTCTATTTTGTCTACACTTCCACTCTTGAAGAGGATGAAGAGTCAGGACTGTCCCTTTAA 402 0.5149 MATISAAITTPSISRATLVQKRVSSPVLGLPAMGKVGRVSCSMEEKPYSVKESSSSMLGMGASLMAAASAAAMSGPAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWTLYFVYTSTLEEDEESGLSL 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01293 133 PANTHER PHOTOSYSTEM II REACTION CENTER W 1 133 - -
Gma02g01293 133 PANTHER PHOTOSYSTEM II REACTION CENTER W PROTEIN, CHLOROPLASTIC 1 133 IPR009806 GO:0009507|GO:0009523|GO:0015979
Gma02g01293 133 Pfam Photosystem II reaction centre W protein (PsbW) 1 133 IPR009806 GO:0009507|GO:0009523|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01293 Gma-Chr2 15015464 15017256 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01293 K02721 - gmx:100499815 219.164
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g01293 02 15015464 15017256 Gma02g01293 02 15015464 15017256 ECH
Gma02g01293 02 15015464 15017256 Gma10g00308 10 2851280 2852910 ECH
Gma10g00308 10 2851280 2852910 Gma02g01293 02 15015464 15017256 GST
Gma19g01524 19 44592780 44594304 Gma02g01293 02 15015464 15017256 PCT
Gma03g01464 03 40883168 40884589 Gma02g01293 02 15015464 15017256 PCT
Gma02g01293 02 15015464 15017256 Gma19g01524 19 44592780 44594304 PCT
Gma02g01293 02 15015464 15017256 Gma03g01464 03 40883168 40884589 PCT