Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00541 ATGGCACCACCTTCATTCTTCTTCGTTTTCTTTTTCATCTTAATATTCTCATGCACCAGCGCCACCACCACCCAACAACAGCGTTTCAAAGAAGCTCCAAAATTCTACAACTCCCCCACGTGCGCCACCCTCCGCCACCACCCGAACCCAAACCACACGTGCCCCGACAACGCTGTCCACGTGGCAATGACCCTCGACGTTTCCTACCTCCGAGGTTCCATGGCCGCAATCCTCTCCGTTCTGCAACACACCTCATGCCCCGAAAATGTGATCTTCCACTTCGTCACCGCAGCTTCTAAATCTTCCTCCGCCGCAAAGCTAAACCAAACGCTAACCACCTCCTTCCCCTACCTGAATTTCCAAATCTACCCCTTCGACGACGACGCCGTTTCGCGCCTCATCTCCACCTCCATCCGCTCAGCACTGGATTGCCCCCTCAACTACGCAAGAAGCTACCTCTCCACCCTCCTCCCTCCCTGCGTCGCGAAAATCGTCTACCTCGACTCGGACTTGATCCTCGTCGACGACATCTCGAAGCTCGCGGAGACACCGCTCTCTGGCACGGCGGTGCTCGCCGCGCCGGAGTACTGCTCCGCGAACTTCTCGGCGTACTTCACGCCCTCGTTCTGGTCCAACCCCTCGCTGTCGCTTGTCCTCGCTAACCGCCGGAGGCCACCGTGCTACTTCAACACGGGCGTAATGGTGATCGACCTCCGGCAATGGCGCGAGGGCGAGTACACGACCGAGATCGAGGAGTGGATGGAGCTGCAGAAGAGGATGCGGATCTACGAGCTTGGCTCACTGCCGCCGTTCCTGCTGGTGTTCGCCGGGAGAATTGCGGCGGTGGACCACCGGTGGAACCAGCACGGGCTCGGCGGAGATAACTTCCGCGGGCTTTGCCGAGACCTTCACCCCGGGCCCGTGAGCCTGCTGCATTGGAGTGGCAAAGGGAAGCCGTGGGCCAGGCTTGACGCCGGCAGGCCTTGCCCTTTGGACGCATTGTGGGCTCCCTACGATCTGCTCGAGACTCGTTTCGCTGCTCTTCAAGCGTAA 1053 0.5954 MAPPSFFFVFFFILIFSCTSATTTQQQRFKEAPKFYNSPTCATLRHHPNPNHTCPDNAVHVAMTLDVSYLRGSMAAILSVLQHTSCPENVIFHFVTAASKSSSAAKLNQTLTTSFPYLNFQIYPFDDDAVSRLISTSIRSALDCPLNYARSYLSTLLPPCVAKIVYLDSDLILVDDISKLAETPLSGTAVLAAPEYCSANFSAYFTPSFWSNPSLSLVLANRRRPPCYFNTGVMVIDLRQWREGEYTTEIEEWMELQKRMRIYELGSLPPFLLVFAGRIAAVDHRWNQHGLGGDNFRGLCRDLHPGPVSLLHWSGKGKPWARLDAGRPCPLDALWAPYDLLETRFAALQA 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00541 350 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 7 349 - -
Gma02g00541 350 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 60 327 IPR029044 -
Gma02g00541 350 Pfam Glycosyl transferase family 8 60 322 IPR002495 GO:0016757
Gma02g00541 350 PANTHER HEXOSYLTRANSFERASE 7 349 - -
Gma02g00541 350 SUPERFAMILY Nucleotide-diphospho-sugar transferases 59 340 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00541 Gma-Chr2 5387470 5388540 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00541 12 350 Glycosyltransferase AT3G50760 69.096 1.75e-179 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00541 K20893 - gmx:100805007 701.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00541 02 5387470 5388540 Gma02g00541 02 5387470 5388540 ECH
Gma01g01819 01 53786847 53788256 Gma02g00541 02 5387470 5388540 PCT
Gma02g00541 02 5387470 5388540 Gma01g01819 01 53786847 53788256 PCT