Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01819 ATGGCCACTAGTGCTGCACCCAAACCCAACCAATATTATTTCTTCACATTAATCCTTCATTTCTGTCTCCTCCTTATCATTTCCACATCCACTACTCAACAACGCTTCAAACAAGCCCCCAAATTCTACAACTCCCCCAGCTGTCCCACCATTCGCCTCTCACCCACCGACACGTGTTCCGACGAGGCAGTCCACGTGGCCATGACCCTGGACGTAACCTACCTCCGCGGCTCCATGGCCGCCATCCTCTCCGTCCTCCAACATTCCTCCTGCCCCGAAAACATCATCTTCCACTTCGTCACCGCCGCCTCCTCCTCCCTCCTCAACCGCACCCTCTCCACCTCCTTCCCCTACCTCAAATTCCAAATCTACCCCTTCGACGACGCCGCCGCCGTCTCCGGCCTCATCTCCACCTCCATCCGCTCCGCCCTGGACTGCCCCCTCAACTACGCCCGCAACTACCTCGCCAACCTCCTCCCCTCCTGCGTCCTCAAAATCGTCTACCTGGACTCCGACCTCGTTCTCGTCGACGACATCGCAAAACTCGCCGCCACCCCCCTCGGAGACAACAACAACACCGTCCTCGCCGCCCCCGAATACTGCAACGCCAACTTCAGCGCCTACTTCACCCCATCCTTCTGGTCCAACCCCTCCCTCTCCCTCACCTTCGCCGGCCGCACCCCCTGCTACTTCAACACCGGCGTCATGGTCATTCACTTGCAACGCTGGCGTGCCGGGGACTATACCACCAAGATCCAGGAGTGGATGGAGCTCCAGAAGAGAATGCGGATCTACGAACTCGGATCGTTGCCTCCGTTTTTGCTCGTTTTCGCGGGAAACATAGTCCCCGTGGATCACAGGTGGAACCAACACGGCCTCGGCGGGGATAACTTCCGCGGGCTTTGCAGAGACTTGCATCCGGGCCCGGTCAGCCTCCTGCATTGGAGTGGCAAGGGCAAGCCCTGGGCCCGCCTCGACGCCAACCGCCCTTGTCCCTTGGATGCCTTATGGGCTCCCTACGATCTTCTCCTAACTCCTTTCGCTCTTGAAGCCTAG 1056 0.5909 MATSAAPKPNQYYFFTLILHFCLLLIISTSTTQQRFKQAPKFYNSPSCPTIRLSPTDTCSDEAVHVAMTLDVTYLRGSMAAILSVLQHSSCPENIIFHFVTAASSSLLNRTLSTSFPYLKFQIYPFDDAAAVSGLISTSIRSALDCPLNYARNYLANLLPSCVLKIVYLDSDLVLVDDIAKLAATPLGDNNNTVLAAPEYCNANFSAYFTPSFWSNPSLSLTFAGRTPCYFNTGVMVIHLQRWRAGDYTTKIQEWMELQKRMRIYELGSLPPFLLVFAGNIVPVDHRWNQHGLGGDNFRGLCRDLHPGPVSLLHWSGKGKPWARLDANRPCPLDALWAPYDLLLTPFALEA 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01819 351 Pfam Glycosyl transferase family 8 65 324 IPR002495 GO:0016757
Gma01g01819 351 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 65 330 IPR029044 -
Gma01g01819 351 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 8 351 - -
Gma01g01819 351 PANTHER HEXOSYLTRANSFERASE 8 351 - -
Gma01g01819 351 SUPERFAMILY Nucleotide-diphospho-sugar transferases 64 342 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01819 Gma-Chr1 53786847 53788256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01819 17 349 Glycosyltransferase AT3G50760 71.513 2.06e-180 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01819 K20893 - gmx:100783054 703.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01819 01 53786847 53788256 Gma01g01819 01 53786847 53788256 ECH
Gma01g01819 01 53786847 53788256 Gma02g00541 02 5387470 5388540 PCT
Gma02g00541 02 5387470 5388540 Gma01g01819 01 53786847 53788256 PCT