Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00516 ATGATAAAAGCAGTGCTGGTGTTGAACACGCAGGGGAAGCCTCGTCTCGCCAAATTCTACGAATTTCAGGTCCCTTGCCGTCCACATTTCCATTTATCTATTGTGTCTTTTGCAGTCTTATGCAGTAGACCTGAACATGTCAGCAATTTTGTGGATGCCGAGTCCTTCTTTGGCCCGGACTCCCGCCTGGTCTACAAGCACTTTGCAACTTTATATTTTGTGTTCATATTTGATAGTTCTGAAAACGAGCTTGCTATGCTTGACTTGATACAAGTGCTTGTGGAAACATTGGACAAATGCTTCAGAAATGTATGTGAGCTTGATATCGTGTTCAACTATAGTAAGATGCATACTATACTAGATGAGATCATTCTCGGAGGCCAGGTGTTGGAGACAAGTTCAAACGAGGTTATGAAGGCTATTGAAGAAATATCAAGGCTCGAATCAGCATCCAAAGCAATCAATCTTGTTCCAAAATCTGTTTCTGGTTGGAGGTCGCAGTAA 504 0.4226 MIKAVLVLNTQGKPRLAKFYEFQVPCRPHFHLSIVSFAVLCSRPEHVSNFVDAESFFGPDSRLVYKHFATLYFVFIFDSSENELAMLDLIQVLVETLDKCFRNVCELDIVFNYSKMHTILDEIILGGQVLETSSNEVMKAIEEISRLESASKAINLVPKSVSGWRSQ 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00516 167 SUPERFAMILY SNARE-like 1 145 IPR011012 -
Gma02g00516 167 ProSitePatterns Clathrin adaptor complexes small chain signature. 63 73 IPR000804 GO:0006886|GO:0016192|GO:0030117
Gma02g00516 167 PANTHER AP COMPLEX SUBUNIT SIGMA 1 157 - -
Gma02g00516 167 Coils Coil 130 150 - -
Gma02g00516 167 PIRSF AP_complex_sigma 1 157 IPR016635 GO:0015031
Gma02g00516 167 Pfam Clathrin adaptor complex small chain 1 146 IPR022775 -
Gma02g00516 167 PANTHER ADAPTOR COMPLEXES SMALL SUBUNIT FAMILY 1 157 IPR016635 GO:0015031
Gma02g00516 167 Gene3D - 1 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00516 Gma-Chr2 5141012 5144859 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00516 K12399 - gmx:100306517 297.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00516 02 5141012 5144859 Gma02g00516 02 5141012 5144859 ECH
Gma16g01279 16 31293716 31298034 Gma02g00516 02 5141012 5144859 GST