Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00493 ATGGAGAAGCTCGCTTCTTCAACTGCAACTGTTATTCTTGTTCCCACTCAACACTCTCTCTTCTTCTTCCCCGTTCCCGCCTTCTCCACCTTCCACCGGAACCGCACCGAACCGCTCTCACCCCTCTGTTGCAAAAGCAGACACCGTCGCCTAGAAGCGTTCTCCAACAAACAGGACCAGTTCTGGGTCAGCGAAGAGGAATTGGAGCTTGAATTGGAAGAAGGAGAAGATTCGTATTTGGACGGTGATGATCACGGAGACGACTCATCGTTCTTATCTCTCAGTGACAAGCCCGACAGGAACATGGCCCTGCTCGATGATTACGAGGGCGAGGAGCTCGACTTTGAATTCGGTCCCGACCACCGAAGCGGGTATGTAACGTTACTTGGGAAGCCAAACGTTGGGAAGAGTACACTGGCAAACCAAATGCTTGGCCAAAAGTTGTCAATAGTTACAGATAAACCTCAAACAACAAGGCATCGGATTCTGTGTATATGTTCTGGCGAGGATTATCAGATGATACTTTATGACAAACCTGGTGTACTACAGAAGGAAATGCATAAGTTAGACTCAATGATGATGAAAAATGTTCGCAGTGCGGCAGTTAATGCTGACTGTGTATTGGTTCTTGTTGATGCTCGTAAAGCTCCTGAAAAAATTGATGGACTGTTGGAAGAAGGCATAGGAGACCTCAAAGATAAACCTCCCACTCTACTGATTCTAAACAAGAAGGACCTTGTTAAACCTGGTGAACTTGCAAAGAAACTTGAGTGGTATGAGAAATTAACTGATGTTGATGAGGTTATACCAGTAAGTGCCAAATATGGTCAGGGGGTTGAAGATGTAAAGGACTGGATACTGTCAAAGCTTCCCAATGGACCAGCTTATTATCCAAAGGATATTGTCAGTGAGCATCCAGAAAGATTTTTTGTAGCTGAAATTGTTAGAGAAAAGATTTTTATGCAGTATCGAAATGAAATTCCATATGCATGTCAGGTAAATGTTGTAAACTATAAAGCTCGGCCAAATGCAAAAGAATACATACAAGTAGAGATTTTGGTTGAGAAAAACTCACAGAAGATTATCCTTATTGGAAGAGAAGGAAAGGCTTTGAAACTGCTTGCAACAGCTGCCCGCCTTGACGTTGAAGACTTCTTACAGAAGAAAGTTTATCTTGAGATTGAAGTGAAGGTTAGAGCAAATTGGCGACAAGATGAAGGGCTTCTTAATCACTATGGTTATGGGGAGCATGGGTCCTTTCCTAGAGCTCTGAGTTATGCTGCTTCTGGATTCGATACTAAACAGACATTGTATAACAAGGAAGTAGCAGAGAAGCGGAAAAATCAACCATCTGAATCCCCCTTTTCTAATCCAATTGTTTTCATTACCTAA 1392 0.4289 MEKLASSTATVILVPTQHSLFFFPVPAFSTFHRNRTEPLSPLCCKSRHRRLEAFSNKQDQFWVSEEELELELEEGEDSYLDGDDHGDDSSFLSLSDKPDRNMALLDDYEGEELDFEFGPDHRSGYVTLLGKPNVGKSTLANQMLGQKLSIVTDKPQTTRHRILCICSGEDYQMILYDKPGVLQKEMHKLDSMMMKNVRSAAVNADCVLVLVDARKAPEKIDGLLEEGIGDLKDKPPTLLILNKKDLVKPGELAKKLEWYEKLTDVDEVIPVSAKYGQGVEDVKDWILSKLPNGPAYYPKDIVSEHPERFFVAEIVREKIFMQYRNEIPYACQVNVVNYKARPNAKEYIQVEILVEKNSQKIILIGREGKALKLLATAARLDVEDFLQKKVYLEIEVKVRANWRQDEGLLNHYGYGEHGSFPRALSYAASGFDTKQTLYNKEVAEKRKNQPSESPFSNPIVFIT 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00493 463 CDD Era 121 290 IPR030388 GO:0005525
Gma02g00493 463 Pfam KH domain 326 403 IPR004044 GO:0003723
Gma02g00493 463 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 126 323 IPR027417 -
Gma02g00493 463 ProSiteProfiles Era-type guanine nucleotide-binding (G) domain profile. 122 292 IPR030388 GO:0005525
Gma02g00493 463 PANTHER GTPASE ERA-LIKE, CHLOROPLASTIC 76 416 - -
Gma02g00493 463 Gene3D - 304 418 IPR015946 -
Gma02g00493 463 Pfam 50S ribosome-binding GTPase 126 243 IPR006073 GO:0005525
Gma02g00493 463 SUPERFAMILY Prokaryotic type KH domain (KH-domain type II) 299 414 IPR009019 GO:0003723
Gma02g00493 463 Hamap GTPase Era [era]. 121 414 IPR005662 GO:0003723|GO:0005525
Gma02g00493 463 Gene3D - 119 303 IPR027417 -
Gma02g00493 463 ProSiteProfiles Type-2 KH domain profile. 323 400 IPR004044 GO:0003723
Gma02g00493 463 TIGRFAM era: GTP-binding protein Era 125 397 IPR005662 GO:0003723|GO:0005525
Gma02g00493 463 PANTHER GTPASE ERA 76 416 IPR005662 GO:0003723|GO:0005525
Gma02g00493 463 TIGRFAM small_GTP: small GTP-binding protein domain 126 285 IPR005225 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00493 Gma-Chr2 4975393 4980751 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00493 K03595 - gmx:100795454 786.949
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00493 02 4975393 4980751 Gma02g00493 02 4975393 4980751 ECH
Gma16g01258 16 30782121 30786785 Gma02g00493 02 4975393 4980751 GST