Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00447 ATGGAACACAAGGTTAATGATAAAGAACCCAACAAAAAGCACTACGTTAGTGCTTTGTGTTGGTGGTTAACAGTGTCCATCATCGCAGTCCTCGTAGTAGTTGCTGGTGTTCTTTCTCTAATAACCAAGTTTAAGTTTGGTCACTCTAATTCACCTGAATTCACTTCTCACCCCACCAACGTTGTTCAGAAATATGCTTCAGCTCTTGAATTGGCCTTGCAATTTTTTGACGTCCAGAAATCTGGTAAGCTGGAGAATAAGAGGGTTTGGTGGAGAGGGGATTCGGGGCTACGAGATGGGAGTGAAGAGAATTTGGATTTATCGAAAGGAATGTATGATGCTGGTGACCACATGAAATTTGGTTTCCCTTTGGCTTTCACTGCAACCGTGTTGTCTTGGGCGATTCTTGAATATGGAGGTCGCATGGATGCGGTGAAGCAGCTACACTATGCACTTGATTCGCTGAAGTGGATCACGGATTATCTTGTCAATGCACACCCTTTTCCTGAAGTGCTCTACATTCAGGTGGGGGATCCTGAGGTGGATCATAATTGCTGGGAAAGGCCTGAAGACATGAAAGAAAAAAGACCACTCACTCAAGTTAATTCATCTTTTccaggaacagaagttgcggcagaaactgcagctgcattggccTCAGCATCTCTTGTTTTTAAGGAGATCGATTTCGCTTACTCTAGGATTCTCCTACGACATGCTCAACAGCTGTTTACTTTTGCTGATGCATATAGAGTTTCCTACAGTGTCAGCATCCCTCAAGTGGGGAAATACTATAACTCATCTGGTTATGGAGACGAACTCTTATGGGCAGGTACCTGGCTCTATCATGCAACTAAGGATCCATCATATCTAAACTATGTGACAGGGCAGAATGAGAAAGCATTTGGTAGTTTAGGAAGTCTATCATGGTTAAGTTGGGATGATAAACATGCTGCAACTCAGGTTCTTTTGTCCAGAGTGAATTTCTTTGGTGAAAGTAACATCCCAGATGCGGAGAATCTCGACCTTCAGATGTACAGAGAAACTGCTGAAATCCTCATGTGCAAGCTTCTACCTGATTCACCAACAGCCACCGCCAACAGAACTGAAAGTGGGCTGATATGGGTGGTACCATGGAACTCTTTGCAACATTCAGTAGCGTCTGCATTCTTAGCTGTTCTTTATAGCGACTACATGCTGACATCTCAAACTGAAATACTATATTGTAGTGGGAAATTGTATAAGCCAGTAGATCTTCGCAAATTTGCCATTTCTCAGGCAGATTATGTTTTAGGTGAAAATCCTATGAAGATGAGTTATCTTGTGGGATATGGAACTCAATACCCCAAATACATACATCATAGAGGGTCTTCCATTCCAGTTAATGCTACAACTGGTTGCAAAGATGGATTCAAGTGGTTTGACTCACCTCACCCTAATCCAAATGTAGCATTTGGAGCACTAGTAGGTGGTCCTTTCTTTGATGAGACATATAATGATTTCAGGAACAACTCAATGCAGGCTGAACCAACCACTTACAGTAGTGCCCTCTTTGTTGCTCTCTTATCTGGCTTGGTTGCCAGTTCCTCCGTAGCGTGGTCTTTTTAG 1608 0.4148 MEHKVNDKEPNKKHYVSALCWWLTVSIIAVLVVVAGVLSLITKFKFGHSNSPEFTSHPTNVVQKYASALELALQFFDVQKSGKLENKRVWWRGDSGLRDGSEENLDLSKGMYDAGDHMKFGFPLAFTATVLSWAILEYGGRMDAVKQLHYALDSLKWITDYLVNAHPFPEVLYIQVGDPEVDHNCWERPEDMKEKRPLTQVNSSFPGTEVAAETAAALASASLVFKEIDFAYSRILLRHAQQLFTFADAYRVSYSVSIPQVGKYYNSSGYGDELLWAGTWLYHATKDPSYLNYVTGQNEKAFGSLGSLSWLSWDDKHAATQVLLSRVNFFGESNIPDAENLDLQMYRETAEILMCKLLPDSPTATANRTESGLIWVVPWNSLQHSVASAFLAVLYSDYMLTSQTEILYCSGKLYKPVDLRKFAISQADYVLGENPMKMSYLVGYGTQYPKYIHHRGSSIPVNATTGCKDGFKWFDSPHPNPNVAFGALVGGPFFDETYNDFRNNSMQAEPTTYSSALFVALLSGLVASSSVAWSF 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00447 535 Gene3D - 62 529 IPR012341 GO:0005975
Gma02g00447 535 PANTHER ENDO-1,4-BETA-GLUCANASE 18 535 - -
Gma02g00447 535 PANTHER ENDOGLUCANASE 2 18 535 - -
Gma02g00447 535 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 429 455 IPR018221 -
Gma02g00447 535 SUPERFAMILY Six-hairpin glycosidases 64 528 IPR008928 GO:0005975
Gma02g00447 535 Pfam Glycosyl hydrolase family 9 65 522 IPR001701 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00447 Gma-Chr2 4509236 4512317 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00447 20 516 Glycoside Hydrolase AT1G75680 62.725 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00447 - K01179 gmx:100782202 1046.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00447 02 4509236 4512317 Gma02g00447 02 4509236 4512317 ECH
Gma02g00447 02 4509236 4512317 Gma16g01206 16 29678589 29681432 ECH