Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00313 ATGAGTGTCGATGATGATGGCGAGGACACATCCGGGATTTCATCGTTCCCATTGGGAATTTTGAGTAACTCAGTGCATCAAGATTCACAAAGTTCTCACGTTACAGCTTTTAATTCAGGTCATGGATCCTCAAAGTTGGACAACGAGTCAACCTCGTCTAACACCATACGGGATGTTCATATTTCAATGCGGTTAATGGAGGACTTTCTTGATCTTGCTAAAGAAAATACAGGAAAGGATTTGGAAACTTGTGGTATACGTGGTGCCTATCTTGAGAAGGGAACCCTCTACATGACTACCCTGATCATACCAAAGCAGGAATCAGCTTCCTATTCTTGTCAAGCTACAAATGAGGAGGAAGTTTTCAAAATTCTAAATGAAAGATCCCTTTATCCTGAGGGATGGATCCATACACATCCTTCTCAAAGTTGTTTCATGTCATCTGTGGATCTGCACACTCAATATTCATATCAGATGATGATTCCTGAGGCATTTGCCATTGTCTTGGCGCCAAATGATACCTCAAGGTCTACCTACTGTCTCTTGTTCTACAATATGGACGATTTCTCACCAATTCTTCTAGTTATTGTTGTGCTTAAAAACTAA 606 0.4059 MSVDDDGEDTSGISSFPLGILSNSVHQDSQSSHVTAFNSGHGSSKLDNESTSSNTIRDVHISMRLMEDFLDLAKENTGKDLETCGIRGAYLEKGTLYMTTLIIPKQESASYSCQATNEEEVFKILNERSLYPEGWIHTHPSQSCFMSSVDLHTQYSYQMMIPEAFAIVLAPNDTSRSTYCLLFYNMDDFSPILLVIVVLKN 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00313 201 Gene3D Cytidine Deaminase, domain 2 37 190 - -
Gma02g00313 201 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 56 163 IPR000555 GO:0005515|GO:0008233|GO:0008237
Gma02g00313 201 ProSiteProfiles MPN domain profile. 59 188 IPR037518 -
Gma02g00313 201 PANTHER AMSH-LIKE PROTEASE 29 178 - -
Gma02g00313 201 SUPERFAMILY JAB1/MPN domain 59 173 - -
Gma02g00313 201 MobiDBLite consensus disorder prediction 31 53 - -
Gma02g00313 201 PANTHER FI19924P1 29 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00313 Gma-Chr2 3277048 3279143 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00313 K11866 - gmx:102667454 405.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00313 02 3277048 3279143 Gma02g00313 02 3277048 3279143 ECH
Gma01g00286 01 3229788 3234474 Gma02g00313 02 3277048 3279143 GST