Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00286 ATGTACAAAAGGTCTAATGAAGAAAAGGATGTAAGTAGTAAGAAGGTTAGAAATTGTGATACAGCAGAAAGCAATATTCAAAGCGCGATTGTCGATGGCGAGGACACATCTGAGATTCCATCATTCCCATTAGGAAATTTGAGTACTAGTTGGTGCTCACTGGTTTGTAAACCGGCTGCTATTAAGACAGCCAACAGATACTTCTTGCTTCAAAAAGTAACTCAGTCCTGGCCTTCCCCTGCCTTGTGTTTTGTGGAGACAGTGCCTCAAGATGCACAAAGTTCTCATGTTACAGCTTTTAATTCAGGTGATGGATCCTCAAAGTCGGACAACGAACGGGATGTTCATATTTCAATGCGGTTAATGGAGGACTTTCTTGATCTTGCTAAAGAAAATACAGAAAAGGATTTGGAAACTTGTGGTATACTTGGTGCCTATCTTGAGAAGGGAACCCTCTATTTGACTACCCTGATCATACCAAAGCAGGAATCAGCTTCCAATTCTtgtcaagctacaaatgaggaggaagtttttaaaattctaaatgaaagatccctttatcctgtgggatggatccatacacatccttctcaaagttgtttcatgtcatcggtggatctgcacactcaatattcctaccagGTGATGATTCCTGAGGCATTTGCCATTGTCTTGGCACCAAATGATACCTCAAGGAGCTGTGGATTATTTCGTCTGACCAAACCTGAAGGAATGAATATTCTAAAAAATTGCCAGGAGACAGGATTTCACCCACACAAAGAACCAGACAATGGCAGCCCCGTATATGAGCACTGCTCCAATGTGTACAAAAACTCCAATCTAAGGTTTGAAATCTTTGATTTACGCCAAAAATGA 876 0.347 MYKRSNEEKDVSSKKVRNCDTAESNIQSAIVDGEDTSEIPSFPLGNLSTSWCSLVCKPAAIKTANRYFLLQKVTQSWPSPALCFVETVPQDAQSSHVTAFNSGDGSSKSDNERDVHISMRLMEDFLDLAKENTEKDLETCGILGAYLEKGTLYLTTLIIPKQESASNSCQATNEEEVFKILNERSLYPVGWIHTHPSQSCFMSSVDLHTQYSYQVMIPEAFAIVLAPNDTSRSCGLFRLTKPEGMNILKNCQETGFHPHKEPDNGSPVYEHCSNVYKNSNLRFEIFDLRQK 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00286 291 Gene3D Cytidine Deaminase, domain 2 92 291 - -
Gma01g00286 291 SMART pad1_6 114 242 IPR000555 GO:0005515|GO:0008233|GO:0008237
Gma01g00286 291 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 113 219 IPR000555 GO:0005515|GO:0008233|GO:0008237
Gma01g00286 291 PANTHER AMSH-LIKE PROTEASE 26 290 - -
Gma01g00286 291 PANTHER FI19924P1 26 290 - -
Gma01g00286 291 SUPERFAMILY JAB1/MPN domain 115 244 - -
Gma01g00286 291 CDD MPN_AMSH_like 113 289 IPR044098 GO:0016579|GO:0061578|GO:0070536|GO:0140492
Gma01g00286 291 ProSiteProfiles MPN domain profile. 115 245 IPR037518 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00286 Gma-Chr1 3229788 3234474 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00286 K11866 - gmx:100807282 597.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00286 01 3229788 3234474 Gma01g00286 01 3229788 3234474 ECH
Gma01g00286 01 3229788 3234474 Gma02g00313 02 3277048 3279143 GST