Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00305 ATGGCGGATTTCGCTTCTTCCCCCGCAACCCTACCCCTCAATCCCCAACCCTCCGAATCCGCACCAGATCCACTCCCCCAATCCGCAACACCACCCTCATCCACGCCCATCGCCACAAACCCTAATCCCAATCCAACGCTTCTTCCTCCGCCGCCCGCTCTCCTCTTTCCGGCGGGCACTCCGCCGCAGGTCCCCGGCGTACTCCCTCCCTCATTCCGCCCGCTCGCTCCGCAATTCTCCCCCGTCCCCTCGCCCAACCCGGCCTTCCAAAGCCCTGCCGTTCCTCCGCCCGGCGTGACCGGCGCCGCCGTGGCAGTTCCGCCGCCGCAGATGCAGCAGATGCTTTCGTACCAGATTCAACCCGGTAATCCGGCCCTGCGGCCCTTCGCTCCGATCCCCAACGGTTACGCTGCAGCTCCGACCATAACTCCCGCGGGAATTCCTCGTTACCCCCCTCCTTATGGAACTATGGTTCGTCCTGTATTTCCTGCACGCCCTCCTGGAGCAGTTAACATACCTACAATATCACGCCCGCCTGTTGCAGGGATCCCTGCAGTTCGCCCAATTATTCCGCCTGTAGTCAGACCTGTGGTAGCCCCTAGTGTTACTCCAGCTGAGAAGCCTCAAAACACAGTTTACATTGGCAAGATTGCACCAACTGTGGAAAATGAGTTCATGCTCTCTCTCCTTCAATTATGTGGAACTATCAAGACCTGGAAACGTCCTCAGGATTTATCAACTGGAACTCCTACAAGTTTTGGGTTTTATGAGTTTGAGTCTGCAGAAGGGGTTCTTCGTGCCTTGCGTCTCCTTACTAAACTGAATATTGATGGGCAAGAATTGAAGGTCAATGTGAATCAAGCTATGAAAGAAAATCTGGAGCGGTATGATAAGACAAAAACTGAGAACTTGAAGAACAAAAAAACTCAGGCAGGAGTAGGTGAAAAAAACGAAGGTGAACAACCTTCTAATGCAAACAAGGATGCAAAGGCTGACACAGAACCCTCAAATAAAGAGGTTCTTGAATCATCAAACAAGGAATCACATGATGTGGCAAACTTTGGGATTGTCACTGATGAAGATAGAGAAGCTGATCGTGAGGCTTTAGAAAAGATTTCAAAGATGATAGAGGAAAGGTTGAAGATTAGACCTTTGCCTGCACCATCTGCTCAGCTGACTGGTGATGGTTCTGTAAATTTAACTTCAGAACAACCTGTTAAAGCAAGGGATGGAGACTCTGTTGTGGATACCGAGAAGAATGAATCTGCTGAAAATAAAAATGAGAAAGAGACAAACAATGATAACAAACCAACCAGTGAACATGAAAGGACTGAAAGTCCTGATAGAAGGCATGATAGAAAAAGCAGAGAGAGGGACCGAGATAGGGAGCTAAAACGAGAAAAAGATAGAGAACTTGAAAGATATGAAAGAGAAGCAGAGCGGGAACGTGTTCGGAAAGAGAGGGAACAAAGACGAAGGGTTGAGGAGACTGAGCGTCAGTATGAAACATATTTGAAGGATTGGGAGTATAGAGAACGAGAGAAAGAGAAAGAGCGTCAGTATGAAAAAGAGAAGGAGAAGGAAAGGGAACGTAAAAGGAGAAAGGAGATACTTTATGATGAAGAGGATGAGGATGAGGATTCTAGGAAGAGGTGGCGCAGAAGTGTGATAGAGGATAAGAGAAAGAAGAGGCTGCGTGAGAAGGAAGATGACCTGGTCGACCGACAAAAAGAAGAGGAAGAAATTGCTGAGACCAAAAAGAAGGCCGAGGAGGAACAGAAGCAACAAAGAGATGCATTAAAGCTATTATCTGAGCATGTGGTAAATGCTGGTAAGGAAAATATGATTACTGAAGAGATTACTATTGAAGTTAAAAGCATCGTTGCTGAACAAGATACTGTAGCTGATTATCATCATGAATATCATATTGGTGACGGTGATTCAATAAATGTCATCAATGATGAATCAATAATAGCATCTGTTGCTACAACTGATGCACAGTCAGGTGGCAATGCTCCTACAAAGAAATTGGGGTTTGGTCTAGTTGGTTCAGGGAAAAGAACATCTGTCCGTTCTGTTTTCCATGAAGAGGATGATAATGAGGCCAAAAAAATGAGGCCATTGGTTCCAATTGATTACTCAACTGAAGAATTGCAGGCAGTTCAACCTACGGTTTCTGGGCCAACGCCACCAAATTTGGCTGCTGCTGCAGAATTTGCAAAGCGTATATCCAGTACAAATTTCAAGGAAGAGAAGCTGGATGGTGAACGGGATAGAAGTAGGCGTTCAAATGAGAAGTCTAACCACCGGGACAGGAGTGATGATGGCACTCACAACAGAGATGAAAACAAGGAGAGAATTCCTGGCCGTGACAGGGATCGAGATCATGGATCGGAGAAACTCAGGACTTCTGATAACAAGAGGCTTTTGGATGCAAAACAATTGATTGATATGATACCAAAGACGAAGGAGGAGTTGTTCTCATATGAGATAGACTGGGCAGTATATGATAAGCATCAATTACATGATAGAATGAGACCGTGGATTTCAAAGAAAATCCAAGAGTTTTTGGGGGAAGAAGAAACTACATTGATAGATTATATTGTTTCCAGTACACAAGAACATGTGAAAGCATCACAAATGCTTGAGCGACTTCAGATCATTTTGGATGAAGAGGCTGAAATGTTCGTTCTGAAGATGTGGAGGATGCTTATCTTTGAAATAAAGAAGGTAGAGTCAGGGCTAGCTTTGAGGTCCTTATATCAAAAGCAAGAATTGGATCTATTTGTAAATTTTCGTTTGAATGATTGGGAAATTGAAACCCTAATAGAAGAGAAGAGCAAAGGCACATCCCAACTCCTAGTCTTAGAGCACCACCGTCAACTGAGCCCAACTGAAACCCTAATAACCATGATAGATTTGGGAATAGTGGCGAATTATGATGATGATGCAGACCAAATCCTAGTCTCCAAGAATAGCACAATTCCTGGAAGTCACACCTCCAACTATGGTGACAAGTCTAGTGATAACAATGCAGAAGTTCGACTACACCACTGCGTACCACAATTGTGGTGA 3075 0.4524 MADFASSPATLPLNPQPSESAPDPLPQSATPPSSTPIATNPNPNPTLLPPPPALLFPAGTPPQVPGVLPPSFRPLAPQFSPVPSPNPAFQSPAVPPPGVTGAAVAVPPPQMQQMLSYQIQPGNPALRPFAPIPNGYAAAPTITPAGIPRYPPPYGTMVRPVFPARPPGAVNIPTISRPPVAGIPAVRPIIPPVVRPVVAPSVTPAEKPQNTVYIGKIAPTVENEFMLSLLQLCGTIKTWKRPQDLSTGTPTSFGFYEFESAEGVLRALRLLTKLNIDGQELKVNVNQAMKENLERYDKTKTENLKNKKTQAGVGEKNEGEQPSNANKDAKADTEPSNKEVLESSNKESHDVANFGIVTDEDREADREALEKISKMIEERLKIRPLPAPSAQLTGDGSVNLTSEQPVKARDGDSVVDTEKNESAENKNEKETNNDNKPTSEHERTESPDRRHDRKSRERDRDRELKREKDRELERYEREAERERVRKEREQRRRVEETERQYETYLKDWEYREREKEKERQYEKEKEKERERKRRKEILYDEEDEDEDSRKRWRRSVIEDKRKKRLREKEDDLVDRQKEEEEIAETKKKAEEEQKQQRDALKLLSEHVVNAGKENMITEEITIEVKSIVAEQDTVADYHHEYHIGDGDSINVINDESIIASVATTDAQSGGNAPTKKLGFGLVGSGKRTSVRSVFHEEDDNEAKKMRPLVPIDYSTEELQAVQPTVSGPTPPNLAAAAEFAKRISSTNFKEEKLDGERDRSRRSNEKSNHRDRSDDGTHNRDENKERIPGRDRDRDHGSEKLRTSDNKRLLDAKQLIDMIPKTKEELFSYEIDWAVYDKHQLHDRMRPWISKKIQEFLGEEETTLIDYIVSSTQEHVKASQMLERLQIILDEEAEMFVLKMWRMLIFEIKKVESGLALRSLYQKQELDLFVNFRLNDWEIETLIEEKSKGTSQLLVLEHHRQLSPTETLITMIDLGIVANYDDDADQILVSKNSTIPGSHTSNYGDKSSDNNAEVRLHHCVPQLW 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00305 1024 MobiDBLite consensus disorder prediction 1 72 - -
Gma02g00305 1024 Coils Coil 458 507 - -
Gma02g00305 1024 SMART pwi_2 837 910 IPR002483 GO:0006397
Gma02g00305 1024 SMART rrm1_1 211 284 IPR000504 GO:0003723
Gma02g00305 1024 MobiDBLite consensus disorder prediction 387 497 - -
Gma02g00305 1024 MobiDBLite consensus disorder prediction 295 359 - -
Gma02g00305 1024 MobiDBLite consensus disorder prediction 295 314 - -
Gma02g00305 1024 MobiDBLite consensus disorder prediction 321 346 - -
Gma02g00305 1024 CDD RRM_RBM25 211 291 IPR034268 -
Gma02g00305 1024 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 212 282 IPR000504 GO:0003723
Gma02g00305 1024 MobiDBLite consensus disorder prediction 568 593 - -
Gma02g00305 1024 Coils Coil 562 606 - -
Gma02g00305 1024 MobiDBLite consensus disorder prediction 392 406 - -
Gma02g00305 1024 MobiDBLite consensus disorder prediction 512 551 - -
Gma02g00305 1024 PANTHER SPLICING FACTOR PWI DOMAIN-CONTAINING PROTEIN / RNA RECOGNITION MOTIF (RRM)-CONTAINING PROTEIN 31 919 - -
Gma02g00305 1024 Pfam PWI domain 844 907 IPR002483 GO:0006397
Gma02g00305 1024 PANTHER SPLICING FACTOR PWI DOMAIN-CONTAINING PROTEIN / RNA RECOGNITION MOTIF (RRM)-CONTAINING PROTEIN 31 919 - -
Gma02g00305 1024 MobiDBLite consensus disorder prediction 746 805 - -
Gma02g00305 1024 MobiDBLite consensus disorder prediction 15 72 - -
Gma02g00305 1024 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 210 288 IPR000504 GO:0003723
Gma02g00305 1024 Coils Coil 510 538 - -
Gma02g00305 1024 SUPERFAMILY PWI domain 842 910 IPR036483 GO:0006397
Gma02g00305 1024 SUPERFAMILY RNA-binding domain, RBD 196 287 IPR035979 GO:0003676
Gma02g00305 1024 MobiDBLite consensus disorder prediction 409 497 - -
Gma02g00305 1024 Gene3D PWI domain 800 916 - -
Gma02g00305 1024 ProSiteProfiles PWI domain profile. 824 921 IPR002483 GO:0006397
Gma02g00305 1024 Gene3D - 202 317 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00305 Gma-Chr2 3193075 3199670 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00305 K12822 - gmx:100803051 1462.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00305 02 3193075 3199670 Gma02g00305 02 3193075 3199670 ECH
Gma01g00293 01 3312261 3319276 Gma02g00305 02 3193075 3199670 GST