Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00291 ATGCTATGCTCTCTAATCCGTTTCCGCCGTTACGCTCCTTCCTACCGCACTCTCCACTCTCTCTTTCCGACGATTAACCGTTTCTCCTCCTCCGTCTCCTCCGCCTCCGCCGCCATGGTTGCTCACGCGAAGGACGAGGCGTACCTCAGCGCGACGATTCCGAAACGCATCCGTCTCTTCGAGACCATCCTGGCGGAGCAGCACACTCAGCGCCTCTCGCTCTCCCCGGATCCTATCAAGGTTACTCTCCCCGACGGCAGCGTCAAGGAGGCGAAGAAGTGGCATACGACGCCGCTTGATGTTGCGCGTGAAATCTCGAAGAATTTGGCCAACAGCGCGCTCATCGCGAAGGTCAATGGCGTGCTCTGGGACATGACTCGCCCTCTCGAGGACGATTGCCAGCTCCAGATCTTCAAGTTCGACGACGACGAAGGCCGCGACACCTTCTGGCACTCCAGCGCCCACATTCTCGGCCAGTCACTTGAGACGGAGTATGGATGCAAGCTCTGCATTGGGCCTTGCACTACAAGAGGAGAGGGATTCTATTATGATGCATTTTACGGGGAGTTGGGTCTCAATGACGATCACTTTAAGCAGATTGAGGCTGGAGCATTGAAGGCTGTTGCGGAAAAGCAACCCTTTGAGCGTATTGAAGTTACACGTGATCAGGCACTTGAGATGTTTTCAGATAATAAGTTTAAGGCAAGTATAACTTTTTTTTTCTTCTGCAGGAGTTGGGTTGAGATTATCAATGATTTGCCTGCCGACAAAACTATCACAGTATACAGATGTGGCCCCTTGGTTGATTTGTGTCGTGGACCCCATATACCTAATACATCCTTTGTCAAAGCAATTGCGTGCTTAAAGGCTTCATCAGCATATTGGAGGGGGGACAAAGATCGGGAAAGTTTACAAAGAGTTTATGGCATATCTTATCCTGATCAGAAAAGTCTAAAGGAATACTTGCATCGGCTGGAGGAGGCTAAAAAGTATGATCACAGGATTTTGGGTGTGAAACAGGAGCTTATTCTTCATCATGAATGGAGCCCGGGAAGCTGGTTTTTTCTTCCGCAAGGCACTCGGATCTACAACAAACTCATGGACTTCATTCGGAATCAGTACAGAGACAGGGGCTATCAAGAGGTCATATCTCCCAATGTATTTAACATGGAACTGTGGGTGCAATCTGGTCATGCTGCAAATTATAGGGAGGATATGTTTATCTTAGAGGTTGACAAACAAGAGTTTGGGTTGAAACCAATGAATTGCCCAGGGCACTGCCTGATGTTTAAACACAGGGTTCGATCATATAGAGAACTTCCTCTTCGTTTCGCTGATTTTGGGGTTTTGCATCGGAATGAGGCTAGTGGCGCCCTGAGTGGATTAACACGTGTTAGGAGATTCCAGCAGGACGATGCACATATTTTCTGCAGGGAGTCCCAGATAAAGGATGAAGTGAGGAACAGCTTGAATTTCATCAATTATGTCTATAAGATATTTGGTTTCACATATGAGCTGAAGCTTTCAACGAGGCCAGAAAAATACCTAGGAGATATTGCAACTTGGGACAAAGCTGAAAGTGCTCTTAAAGAAGCTTTAGATGATTTTGGCAAGCCTTGGCAGTTGAATGAAGGGGATGGTGCATTCTATGGACCAAAGATAGACATCAGTGTATCTGATGCATTGGGTAGGAAATTCCAGTGTGCAACTTTGCAGCTTGACTTCCAGCTTCCTGATCGTTTTAAGTTGGAATTCTCAGCTGAGGATGAAGCCAAAATTGAGAGACCTGTAATGATACACAGAGCCATTCTAGGATCTGTTGAACGCATGTTTGCCATACTTTTAGAGCACTACAAGGGTAAATGGCCTTTCTGGCTCAGTCCTCGTCAAGCAATTGTATGCCCTGTGTCTGAAAAGTCACAAGCTTATGCATTACAGGTGCGAGATCAGATCCACCAAGCAGGGTATTACGTTGATGCTGATACAACTGATAGGAAGATTCAAAAGAAGGTGCGAGAAGCACAATTAGCACAATACAACTACATCTTGGTTGTTGGAGAGGAGGAAGCTAATACAGGACAGGTGAGTGTACGAGTTAGAGACTTGGCAGAACATAAGGTTATGAGTATTGAGAAGCTACTTGAACATTTCAGAGACAAAGCTGCAGCTTTCGAATGA 2178 0.4656 MLCSLIRFRRYAPSYRTLHSLFPTINRFSSSVSSASAAMVAHAKDEAYLSATIPKRIRLFETILAEQHTQRLSLSPDPIKVTLPDGSVKEAKKWHTTPLDVAREISKNLANSALIAKVNGVLWDMTRPLEDDCQLQIFKFDDDEGRDTFWHSSAHILGQSLETEYGCKLCIGPCTTRGEGFYYDAFYGELGLNDDHFKQIEAGALKAVAEKQPFERIEVTRDQALEMFSDNKFKASITFFFFCRSWVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKAIACLKASSAYWRGDKDRESLQRVYGISYPDQKSLKEYLHRLEEAKKYDHRILGVKQELILHHEWSPGSWFFLPQGTRIYNKLMDFIRNQYRDRGYQEVISPNVFNMELWVQSGHAANYREDMFILEVDKQEFGLKPMNCPGHCLMFKHRVRSYRELPLRFADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCRESQIKDEVRNSLNFINYVYKIFGFTYELKLSTRPEKYLGDIATWDKAESALKEALDDFGKPWQLNEGDGAFYGPKIDISVSDALGRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSEKSQAYALQVRDQIHQAGYYVDADTTDRKIQKKVREAQLAQYNYILVVGEEEANTGQVSVRVRDLAEHKVMSIEKLLEHFRDKAAAFE 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00291 725 Gene3D - 622 724 IPR036621 -
Gma02g00291 725 TIGRFAM thrS: threonine--tRNA ligase 150 720 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Gma02g00291 725 PRINTS Threonyl-tRNA synthetase signature 418 446 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Gma02g00291 725 PRINTS Threonyl-tRNA synthetase signature 451 474 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Gma02g00291 725 PRINTS Threonyl-tRNA synthetase signature 552 580 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Gma02g00291 725 PRINTS Threonyl-tRNA synthetase signature 596 609 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Gma02g00291 725 PRINTS Threonyl-tRNA synthetase signature 623 635 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Gma02g00291 725 ProSiteProfiles TGS domain profile. 77 139 IPR004095 -
Gma02g00291 725 SUPERFAMILY Class II aaRS and biotin synthetases 332 615 IPR045864 -
Gma02g00291 725 SMART tRNA_SAD_4 259 308 IPR012947 GO:0004812|GO:0005524|GO:0043039
Gma02g00291 725 CDD TGS_ThrRS 79 144 - -
Gma02g00291 725 Pfam Threonyl and Alanyl tRNA synthetase second additional domain 259 308 IPR012947 GO:0004812|GO:0005524|GO:0043039
Gma02g00291 725 Gene3D - 142 312 - -
Gma02g00291 725 ProSiteProfiles Aminoacyl-transfer RNA synthetases class-II family profile. 357 623 IPR006195 -
Gma02g00291 725 Gene3D - 77 138 IPR012675 -
Gma02g00291 725 SUPERFAMILY Class II aaRS ABD-related 616 720 - -
Gma02g00291 725 SUPERFAMILY TGS-like 79 139 IPR012676 -
Gma02g00291 725 SUPERFAMILY ThrRS/AlaRS common domain 141 330 IPR018163 GO:0000166
Gma02g00291 725 PANTHER THREONINE--TRNA LIGASE, CYTOPLASMIC 42 724 - -
Gma02g00291 725 Hamap Threonine--tRNA ligase [thrS]. 144 723 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Gma02g00291 725 Pfam TGS domain 79 139 IPR004095 -
Gma02g00291 725 CDD ThrRS_core 332 628 IPR033728 -
Gma02g00291 725 PANTHER THREONINE-TRNA LIGASE 42 724 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Gma02g00291 725 CDD ThrRS_anticodon 628 718 - -
Gma02g00291 725 Pfam tRNA synthetase class II core domain (G, H, P, S and T) 413 618 IPR002314 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Gma02g00291 725 Pfam Anticodon binding domain 630 719 IPR004154 -
Gma02g00291 725 Gene3D Bira Bifunctional Protein; Domain 2 314 621 IPR045864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00291 Gma-Chr2 3056888 3067453 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00291 K01868 - gmx:100802879 1424.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00291 02 3056888 3067453 Gma02g00291 02 3056888 3067453 ECH
Gma01g00303 01 3466627 3476968 Gma02g00291 02 3056888 3067453 GST