Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00258 ATGTCCGATCCTTCGAGGGGTCGCGTCACCATTACTCTAGGGCGTAGCGGTCATGTTGTGAAGAGGGATGTATCTGCTGCAGATGTTTCTTCTTTCTCTTCTCTTCACTCAGCTGGCACTAAGCGTTCTGTAAGAGACAGAATTGGAAGTAATGCAGATAATTCTGGGTGGTATGGAAATGGACATAGCGGCAATAAACGACACCGAGGAGATGTAAGCATGCAAAATGGACTGGATGGCAATGACCTTCGATTGAAGCTCATGCGGAAAAGTGCATCTAGGCAGACTGACAGCAATGGCAATAAGAGGCATATGGACCTCCGTGAAAAACTTTCAAAGGCAAGTCACCCTCTGACTAACAGTTATAATTCAAAGCAGCATGGGCCAGAATCAAGGGAAACTAGTCTGTTGAGGCAAATTCCCTCAGCTAGAAGTTCTGATGATTTACTGCGTATGAAATCCATGAGAAGCTCATACTCTCCTTGGACATTGGATCATATTAGGAGAAGATCACCAGATGGGTTTCCAAGTACTTCCAGGGGGATTTCCCCCCAAAGGGATGTCCAAGACCTACATAGAAGGCCTGTAAGCAGGACATATGATGGTGTCAGTTCAGTTTCATATGTAGGTAGGGATGTTCTAGAAACTTCGAGGCCTCCAGTAAGTGCACCTCAATCTTTCATGTCACGCTCCACAATGTCCACATTACCTCCAGTAACTGCCAAGCCTGTAGCATCTCATCCTGGCCAACTTCCTCCATCGGGCAGTGTTGCTCAAAGGTCTTCATATGTGGGTGATGAACAAGTACAAGTACAACAGTCTCACCAAACTGTGGATGGCCTGTTACATGCATTGGGACTTCAAAAATATGCCATTCTCTTTAAGGCTGAGGAAGTGGATATGACTGCATTGAAGCAGATGGGAGAAAATGACCTCAAAGAGCTTGGGATTCCTATGGGTCCAAGGAAAAAAATTCTTCTCGCTCTCTTGCCCCGTACCAAGCGTCAACAATGA 1014 0.4586 MSDPSRGRVTITLGRSGHVVKRDVSAADVSSFSSLHSAGTKRSVRDRIGSNADNSGWYGNGHSGNKRHRGDVSMQNGLDGNDLRLKLMRKSASRQTDSNGNKRHMDLREKLSKASHPLTNSYNSKQHGPESRETSLLRQIPSARSSDDLLRMKSMRSSYSPWTLDHIRRRSPDGFPSTSRGISPQRDVQDLHRRPVSRTYDGVSSVSYVGRDVLETSRPPVSAPQSFMSRSTMSTLPPVTAKPVASHPGQLPPSGSVAQRSSYVGDEQVQVQQSHQTVDGLLHALGLQKYAILFKAEEVDMTALKQMGENDLKELGIPMGPRKKILLALLPRTKRQQ 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00258 337 MobiDBLite consensus disorder prediction 110 152 - -
Gma02g00258 337 ProSiteProfiles SAM domain profile. 273 336 IPR001660 GO:0005515
Gma02g00258 337 MobiDBLite consensus disorder prediction 30 79 - -
Gma02g00258 337 Pfam SAM domain (Sterile alpha motif) 273 329 IPR001660 GO:0005515
Gma02g00258 337 MobiDBLite consensus disorder prediction 252 269 - -
Gma02g00258 337 Gene3D - 275 337 IPR013761 -
Gma02g00258 337 MobiDBLite consensus disorder prediction 114 142 - -
Gma02g00258 337 PANTHER PA-PL1 PHOSPHOLIPASE FAMILY 1 336 - -
Gma02g00258 337 PANTHER OSJNBA0060P14.15 PROTEIN 1 336 - -
Gma02g00258 337 MobiDBLite consensus disorder prediction 166 192 - -
Gma02g00258 337 SUPERFAMILY SAM/Pointed domain 274 329 IPR013761 -
Gma02g00258 337 SMART SAM_4 270 335 IPR001660 GO:0005515
Gma02g00258 337 MobiDBLite consensus disorder prediction 216 269 - -
Gma02g00258 337 MobiDBLite consensus disorder prediction 219 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00258 Gma-Chr2 2711169 2718151 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00258 272 329 Glycosyltransferase AT3G07170 60.345 4.09e-17 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00258 - - gmx:100797199 666.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00258 02 2711169 2718151 Gma02g00258 02 2711169 2718151 ECH
Gma01g00335 01 3930459 3938083 Gma02g00258 02 2711169 2718151 GST