Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00335 ATGTCCGATCCTTCGAGGGGTCGCGTTACCATTACTCTAGGGCGTAGCGGTCATGTTGTGAAGAGGGATGCATCTGCTGTAGATGTTTCTTCTTTCTCTTCTATTCATTCAGCTGGCACTAAGCGGTCTGTAAGAGACAGAATTGGAAGTAATGCAGATAATTCTGGGTGGCATGGAAATGGACATAGCGGCAATAAACGACACCGAGGAGATGTAAGCATGCAAAATGGACTGGATGGCAATGATCTACGATTGAAGCTCATGCGAAAAAGTGCATTGGGGCAGGCTGACAGCAATGGCAGTAAGAGGCATATGGACCTCCGTGAAAAGCTGTCAAAGGCAAGTCACCCTCTGGCTAACACTTATAATTCGAAGCAGCATGGGCCAGATTCAAGGGAAACAAGTTTGAGGCAAATTCCCTCAGCTAGAAGTTCTGATAAATTACTGCGTATGGAATCCATGAGAAGCTCATACTCTCCTTGGACATTGGATCATATTAGGAGAAGATCACCAGATGGGTTTCCAAGTACTTCCAGGGGGATTTCCCCCCAAAGGGATGTCCAAGACCTACATAGAAGGCCTGTAAGCAGGACATATGATGGTGTCAGATCAGTTTCATATGTAGGTAGGGATGTTCTTGAAACTTCGAGGCCTCCAATAAGTACACCCCAATCTTTCATGTCACGCTCCACAATGTCCACATTGCCTCCAGTAACTGTCAAGCCTGTAGCATCTCATCCTGGTCAACTTCCTCCATCGGGCAGTGTTGCTCAAAGGCCTTCATATGTGGGTGATGAACAAGTACAAGTACAACAATCTCACCAAACTGTGGATGGCCTATTACATGCATTGGGACTTCAAAAATATGCCATTCTCTTTAAGGCTGAGGAAGTGGATATGACTGCATTGAAGCAGATGGGAGAAAATGACCTCAAAGAGCTTGGGATTCCTATGGGTCCCAGGAAAAAAATTCTTCTTGCTGTCTTGCCCCGTACTAAGCGTCAACAATGA 1011 0.458 MSDPSRGRVTITLGRSGHVVKRDASAVDVSSFSSIHSAGTKRSVRDRIGSNADNSGWHGNGHSGNKRHRGDVSMQNGLDGNDLRLKLMRKSALGQADSNGSKRHMDLREKLSKASHPLANTYNSKQHGPDSRETSLRQIPSARSSDKLLRMESMRSSYSPWTLDHIRRRSPDGFPSTSRGISPQRDVQDLHRRPVSRTYDGVRSVSYVGRDVLETSRPPISTPQSFMSRSTMSTLPPVTVKPVASHPGQLPPSGSVAQRPSYVGDEQVQVQQSHQTVDGLLHALGLQKYAILFKAEEVDMTALKQMGENDLKELGIPMGPRKKILLAVLPRTKRQQ 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00335 336 MobiDBLite consensus disorder prediction 39 79 - -
Gma01g00335 336 MobiDBLite consensus disorder prediction 116 142 - -
Gma01g00335 336 PANTHER OSJNBA0060P14.15 PROTEIN 1 335 - -
Gma01g00335 336 PANTHER PA-PL1 PHOSPHOLIPASE FAMILY 1 335 - -
Gma01g00335 336 MobiDBLite consensus disorder prediction 167 190 - -
Gma01g00335 336 SMART SAM_4 269 334 IPR001660 GO:0005515
Gma01g00335 336 Pfam SAM domain (Sterile alpha motif) 272 328 IPR001660 GO:0005515
Gma01g00335 336 MobiDBLite consensus disorder prediction 237 260 - -
Gma01g00335 336 ProSiteProfiles SAM domain profile. 272 335 IPR001660 GO:0005515
Gma01g00335 336 MobiDBLite consensus disorder prediction 112 151 - -
Gma01g00335 336 Gene3D - 274 336 IPR013761 -
Gma01g00335 336 SUPERFAMILY SAM/Pointed domain 273 329 IPR013761 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00335 Gma-Chr1 3930459 3938083 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00335 271 328 Glycosyltransferase AT3G07170 58.621 1.00e-16 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00335 - - gmx:100796844 658.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00335 01 3930459 3938083 Gma01g00335 01 3930459 3938083 ECH
Gma01g00335 01 3930459 3938083 Gma02g00258 02 2711169 2718151 GST