Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00250 ATGTTCGGAGTTTGCGAACGACGTCGCAGTGCCGGGGGAGTGGGCAGGGTTGACCCGGGTCAATGCCGAACCAAACCGCGCCGTCAAATTCCCGAACCGGAGACACAAAGTCAAAGAATAAAAACCGCCTTCACGACGTCGTTTTTCACAGTTGCTTGTTTGTGCGCGGCGAAGGGGAGCGGAGGACGGTGCGGCGGCGCCGCCACAAGACTCTGCGCTCGCTGCGAAGCCGTTGCTTATTGCTCTCTCTCTCACCAGATTGCACACTGGAATCGTCACAAACACGAGTGTGATAGTTTGCAACAGCAATTGAAAAGTGTTGAAGTCCTCAACGATTTTCCCTTCACTTTCTCTCGCGAAGCCACGTTTCAGCTTTGTGTGAAGCAGGAAACTAGGTGTTCATTTTTGAGCAAGAGAGGTCTTCATCAAGTGGGAATGTGGAAGCATGAATGCGGTTGTGGGGCATCCTCTGCTTCATTTGATTGTTTAGGGTTAAACAATGGTTGGGATCTCCCTAGTAATTTATGTCCCTGTTGGCCTAGCTCTCCGGTATCAGATTCAGAGCAGTTGCATAGTTGGAGAGACTACTATAAGTGGAGATGCATCCCACTAGACTCGCTTGTTGCTTTGCTTCTTCAATCGCCACTTACAATATATCATGCTGCTCGACTTGTTGGAGTTACCGCCTTGAATCCTGAAATCATTGGTAAGTTGTACGTACATTACCTTGGACCTGAGAAAGAGCTGCTACAACTTGCTGTGTTTGGAGAATTACTGGCACTCTTCCCTGGTGTACGAATTCATATAGAACTTGTTGGACCTGCAATTCCTCCTCAAAGGGATGGTGAGAAGATTCACATTTCTAAGTATCCTTGTTGCAATGAAGACGAATGTGAATGCAAAATAGGAAGTACAGATACGTTCTTAGAAACACAATCTGGTATCACTTCTGCTTTGACATTGCAACTTTGGCAAGGATTCTATCATGACCGATATAGAGATATTGTTAAGGATTCCTTTCCTCGGCTAATAATTGCTCCAAATGGTGGCATTGCTGCTTATTCCAGTTGGTTACCAAGTATTGAGTTAATTAAAAAGATTGATGTCCCAGTTGTTTTTACTGATTATTGTGAAGAAGCTTGTCATCTTGCTGCCAGTTGCATTAAGACTGTAACTGGACGACCTCTTAAATTGCTTGTTCAGTTAAATCCTTTCAGGCAGCCCATGGCCGTGGAAGATAGCGTGCTGTTACTTCCCTGCTACTCGAATTGTTATCTTTTTGGATGTAACGAGAATACTCATAATATCTTGAGCCACTATATAATCCAGAACAACTAA 1338 0.4484 MFGVCERRRSAGGVGRVDPGQCRTKPRRQIPEPETQSQRIKTAFTTSFFTVACLCAAKGSGGRCGGAATRLCARCEAVAYCSLSHQIAHWNRHKHECDSLQQQLKSVEVLNDFPFTFSREATFQLCVKQETRCSFLSKRGLHQVGMWKHECGCGASSASFDCLGLNNGWDLPSNLCPCWPSSPVSDSEQLHSWRDYYKWRCIPLDSLVALLLQSPLTIYHAARLVGVTALNPEIIGKLYVHYLGPEKELLQLAVFGELLALFPGVRIHIELVGPAIPPQRDGEKIHISKYPCCNEDECECKIGSTDTFLETQSGITSALTLQLWQGFYHDRYRDIVKDSFPRLIIAPNGGIAAYSSWLPSIELIKKIDVPVVFTDYCEEACHLAASCIKTVTGRPLKLLVQLNPFRQPMAVEDSVLLLPCYSNCYLFGCNENTHNILSHYIIQNN 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00250 445 Gene3D - 56 103 - -
Gma02g00250 445 Pfam MYND finger 63 97 IPR002893 -
Gma02g00250 445 PANTHER ZINC ION BINDING PROTEIN 55 428 - -
Gma02g00250 445 Pfam MSS51 C-terminal domain 215 413 IPR046824 -
Gma02g00250 445 SUPERFAMILY HIT/MYND zinc finger-like 64 99 - -
Gma02g00250 445 ProSiteProfiles Zinc finger MYND-type profile. 61 97 IPR002893 -
Gma02g00250 445 PANTHER ZINC ION BINDING PROTEIN 55 428 - -
Gma02g00250 445 MobiDBLite consensus disorder prediction 9 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00250 Gma-Chr2 2507364 2516274 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00250 K24081 - gmx:100808017 717.613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00250 02 2507364 2516274 Gma02g00250 02 2507364 2516274 ECH
Gma01g00339 01 4037350 4041466 Gma02g00250 02 2507364 2516274 GST