Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00243 ATGGAGTTAGAAATAATTGCTGAATATGGTGTCTTGAGCTGGGAGAAATTTAGTATCCAGTTCCGTGTTGGTAATGTTTCTTCTGGAAGTGGACTAGTAAATGTTGATGTGATTGTTTTGGATGAAGTTCATTACCTTAGTGACATATCTCACGGTACAGTCTGGGAGGAGATTGTTATTTATTGCCCTAAAGAAGTTAAACTTATTTGCCTGTCAGCAACTGTTGCAAATCCAGATGAGTTGGCTGGGTGGATTGGTCAGATACTCAGATTGTGCTGTTACAATATTCACGGTGAAACAGAATTGGTAACATCATCAAAACGCCCTGTTCCGTTGACTTGGCATTTCTCTCTGAAGAATTCCTTATCACCACTTCTTAACGAGAAGGGAACACACATGAACAGGAAGCTGTCACTCAATTATTTACAACTTCAAGCTGCAGCAGCTAAACCTTACAAGGATGATTGGTCAAGAAAAAGGAATTCCCAGAAACGAGGAACTCACTCAGGCTATGATAGTGATGATAACATGTTTGAACAACGTTCTCTTTCAAAGAATAACATAAATGCAATTCGTCATTCACAATCCAGGGATATGCTGCCAGCTATTTGGTTTATTTTTAGCAGGAAGGGTTGTGATGCAGCTGTGCTATATCTTGAAAATTGCAAACTTTTAGATGAGTGTGAAACAAGTGAGGTTGAACTAGCCTTCAAAAGGTTCCGCAAGCTGTATCCTGATGCTGTCAGAGAATCAGCTGTGAGAGGGCTTTTGCAAGGGGTTGCTGCCCATCATGCTGGATGTCTACCTTTGTGGAAGGCATTCATAGAAGAGTTGTTTCAAAGAGGACTTGTCAAAGTTGTTTTTGCTACAGAAACCCTGGCTGCTGGAATCAATATGCCTGCTAGAACAGCTGTTATTTCATCCCTCTGCAAAAGAAGTGATAGTGGACGTATAACATTGAGCTCAAATGAACTGCTTCAGATGGCTGGGCGTGCTGGACGCAGAGGCATTGATGAAATTGGTCATGTAGTTCTCATCCAAACTCCTAATGAAGGTGCTGAAGAGGGCTGCAAAGTATTGTTTGCTGGACTAGAGCCTCTAGTGTCACAGTTTACTGCTTCATATGGAATGGTTTTGAATCTTCTTGCTGGTGTGAAAGCCATTCATAGGTCAAATGAATCAGATAACATGAAACCTTCCACAGGGAAAACCTTGGAAGACCGCTGCTGCAATTCGAGGAGAAAATGA 1248 0.4151 MELEIIAEYGVLSWEKFSIQFRVGNVSSGSGLVNVDVIVLDEVHYLSDISHGTVWEEIVIYCPKEVKLICLSATVANPDELAGWIGQILRLCCYNIHGETELVTSSKRPVPLTWHFSLKNSLSPLLNEKGTHMNRKLSLNYLQLQAAAAKPYKDDWSRKRNSQKRGTHSGYDSDDNMFEQRSLSKNNINAIRHSQSRDMLPAIWFIFSRKGCDAAVLYLENCKLLDECETSEVELAFKRFRKLYPDAVRESAVRGLLQGVAAHHAGCLPLWKAFIEELFQRGLVKVVFATETLAAGINMPARTAVISSLCKRSDSGRITLSSNELLQMAGRAGRRGIDEIGHVVLIQTPNEGAEEGCKVLFAGLEPLVSQFTASYGMVLNLLAGVKAIHRSNESDNMKPSTGKTLEDRCCNSRRK 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00243 415 Pfam Helicase conserved C-terminal domain 275 336 IPR001650 -
Gma02g00243 415 PANTHER ATP-DEPENDENT RNA AND DNA HELICASE 23 406 - -
Gma02g00243 415 Gene3D - 11 98 IPR027417 -
Gma02g00243 415 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 106 351 IPR027417 -
Gma02g00243 415 MobiDBLite consensus disorder prediction 392 415 - -
Gma02g00243 415 Gene3D - 109 366 IPR027417 -
Gma02g00243 415 PANTHER DEXH-BOX ATP-DEPENDENT RNA HELICASE DEXH15 CHLOROPLASTIC 23 406 - -
Gma02g00243 415 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 198 382 IPR001650 -
Gma02g00243 415 MobiDBLite consensus disorder prediction 153 176 - -
Gma02g00243 415 CDD SF2_C_Ski2 170 348 - -
Gma02g00243 415 SMART helicmild6 250 336 IPR001650 -
Gma02g00243 415 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 86 IPR027417 -
Gma02g00243 415 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 93 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00243 Gma-Chr2 2452800 2456530 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00243 K26077 - gmx:100780908 697.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00243 02 2452800 2456530 Gma02g00243 02 2452800 2456530 ECH
Gma01g00346 01 4098683 4106062 Gma02g00243 02 2452800 2456530 GST