Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00226 ATGGCAGAAGGTGTGAAATTGGAGGACAGATGGGGATACTATGTTGCAACTTCTTCTCAGGCATGCGTTTCAGCCATCAACTCTTACTACCATCAGGTTCTCATCTATGGCAGAGAGAGGTCTGTGATTCTGGAAGCAGTGGCACATGACAAACACTGTGTCTTGGCCAACATCTTGGCAGCACATTTCCTTCACTCTTCTGGCTCTTCCCGTGCTCTCACTTGTCTTCATGCCGCTAAGTCCAACCTTGAACATGCCACCTTGTACGAGAAACTAGTTTTCGATGCCATCAGTTATATGCTATCTGAAGATAGAGACGATGATGTAGCTGTTGAATTGCATTCCAAGCTTCTGAAAGAGTTCCCAAGAGATCTGGTTTCTCTAAAGAGAGCACAAGTCATATGCTTCTACATGGGTCTGCCTGGTCTTTCTTTATCTCTTATTCAAAAGGTTCTGCCTCACAATGAAGGAGAAAATTTCATATATGGCATGCTTGCTTTTCCTTTGCTTGAGCTTGGACGGATGGAGGAAGCTGAGAAAGCTGCCAAAAGGGGATTTGAAATCAATAAGCAAGACAGCTGGGCACAGCATGCTTTATGCCATGTTCTTCAGTATAAGTGCTGTTTTAGAGAAGCTGTTAAGTTCATGGAAGAATGTTCATCATCATGGGGTTCTTCATCTTTTATGCTGACACACAATTGGTGGCATGTAGCACTTTGCTACTTAGAAGGTAATGCCCCGAGACAAAGAGTGCTAGAGATATATGACAATTATATATGGAAGGAGCTAGACAGAAATGATTCTATGAGTGCAGAGGTTTACTTAAATGCTGCGGGTCTGCTTTTGCGGTTGTATGTACGTGGTGAATTGGATATCATTGGTGATCGTCTCAAGATGCTTGCGGAATGCCTAACTAATCAAGAAAACTGGTATATGGAGTGGCACTTTGATGTATTGATAGTGTGGACTTTGGCAAAGACTGGAGAAATTTCAAAAGCAGAAGATCTTCTTAAGGGCTTAAAAAACAGGTTTTTGAGGATGACTAAAAAGAAGCAACAACGGATGCAGAGAGGAATGATGCTTGCAGAAGCACTTTATGCGTATGGAATAGCTGATGATAGGCGTGGGCTAGAATTACTTGATCCAGATTTCGATGCCACTGATTATAAGATCATTGGGGCATCTGATGAACAAGTGGACGTATTCAATGAAGTTTGGTATAATATGTTACTGAATATTGGAAATGCGTTGAAGGCAATTGAAGTGTTAGAGAAGCAAATCAAGAAGAGGGATGGCGTCCCCTACTTGTGGCGTCTACTAGAGAGGGCATACAAACTAGCTAACAAGCCAGAAGAAAGAATTGCGAACGAGAAGGCCACGGCTTTGGAGAGTCGTTACTTCAATTAA 1407 0.4236 MAEGVKLEDRWGYYVATSSQACVSAINSYYHQVLIYGRERSVILEAVAHDKHCVLANILAAHFLHSSGSSRALTCLHAAKSNLEHATLYEKLVFDAISYMLSEDRDDDVAVELHSKLLKEFPRDLVSLKRAQVICFYMGLPGLSLSLIQKVLPHNEGENFIYGMLAFPLLELGRMEEAEKAAKRGFEINKQDSWAQHALCHVLQYKCCFREAVKFMEECSSSWGSSSFMLTHNWWHVALCYLEGNAPRQRVLEIYDNYIWKELDRNDSMSAEVYLNAAGLLLRLYVRGELDIIGDRLKMLAECLTNQENWYMEWHFDVLIVWTLAKTGEISKAEDLLKGLKNRFLRMTKKKQQRMQRGMMLAEALYAYGIADDRRGLELLDPDFDATDYKIIGASDEQVDVFNEVWYNMLLNIGNALKAIEVLEKQIKKRDGVPYLWRLLERAYKLANKPEERIANEKATALESRYFN 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00226 468 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 38 9 466 IPR033891 -
Gma02g00226 468 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Gma02g00226 468 SUPERFAMILY TPR-like 102 229 IPR011990 GO:0005515
Gma02g00226 468 Coils Coil 330 350 - -
Gma02g00226 468 CDD StaR_like 49 407 IPR033891 -
Gma02g00226 468 Gene3D Tetratricopeptide repeat domain 69 462 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00226 Gma-Chr2 2208326 2214542 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00226 - - gmx:100803771 944.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00226 02 2208326 2214542 Gma02g00226 02 2208326 2214542 ECH
Gma01g00365 01 4423074 4428636 Gma02g00226 02 2208326 2214542 GST