Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00365 ATGGAAGGTGTGAAATTGGAGGACAGATGGGGATACCAGGTTGCAACTTCTTCTCAGGCCTGCGTTTCAGCCATCAACTCCTACTACCATCAGGTTCTCATCTATGGTAGAGAGAGGTCTGTGATTCTGGAAGCAGTGGCACATGACAAACACTGTGTCTTGGCCAACATCTTGGCAGCACATTTCCTTTACTCCTCTGGTTCTTCTCGTGCTCTCACTTGTCTTCATGCCGCTAAGTCCCACCTTGAACATGCCACCTTGTACGAGAAACTAGTTTTCGATGCCATCAGTTATATGCTATCTGAAGATAGAGACGATGATGTAGCTGTTGAATTGCATTCTAAGCTTCTAAAGGAGTTCCCAAGAGATCTGCTTTCTCTAAAGAGAGCACAAGTCTTATGCTTCTACATGGGTCTGCCTGGTCTTTCTTTATCTCTTATTCAGCAGATTCTGCCTCACAATGAAGGAGAAAATTATATATATGGCATGCTTGCTTTTCCTTTGTTGGAGCTTGGACGGATGGAGGAAGCTGAGGAAGCTGCCAAAAGGGGATTTGAAATCAATAAGCAAGACTGCTGGTCACAGCATGCTTTATGCCATGTCCTTCAGTATAAGTGCTGTTTTAGagaagctgttaagttcatggaagaatgttcatcatcatggggttCTTCTTCATCTTTTATGTTGACACACAATTGGTGGCATGTAGCACTTTGTTACTTAGAAGGTAATGCTCCGAGACAAAGAGTGCTAGAGATATATGACAATTATATATGGAAGGAGCTAGAAAGAAATGATTCTATGAGTGCAGACGTTTACTTAAATGCCGCGGCTCTGCTTTTGCAGTTGTATGTACGTGGTGAATTGGATATTGTTGGTGATCGTCTCAAGATTCTATCAGAATGCCTAACTAATCAAGAAAACTGGTATATGGAATGGCACTTTGATGTATTGATAGTGTGGACTTTGGCAAAGACCGGAGAAATTTCTAAAGCAGAAGATCTTCTAAAGGGCTTAAAAAACAGGCTTTTGAGGATGACTAAAAAGAAGCAACAACGAATGCAGAGAGGAATGATGCTTGCAGAAGCACTCTACGCTTATGGAAGAGATGACGACAATCGTGGACTGGAACTACTTGATCCAAATTTTGATGCCACTGATTACAAGATCATTGGGGCATCTGATGAACAAGTCGACGTATTCAATGAAGTTTGGTATAACATGTTGCTGAATACTGGAAAACCGTTGAAGGCAATTGAAGTGTTAGAGAAGCAAATCAAGAAGAGAGATGGCGTCCCCTACTTGTGGCGTCTACTAGAGAGGGCATACAAACTAGCTAACAAAGAAGAAGAAGAAAGAATTGCGAACGAGAAGGCCACGGCTTTGGAGAGTCGTTACTTCAATTAA 1410 0.4078 MEGVKLEDRWGYQVATSSQACVSAINSYYHQVLIYGRERSVILEAVAHDKHCVLANILAAHFLYSSGSSRALTCLHAAKSHLEHATLYEKLVFDAISYMLSEDRDDDVAVELHSKLLKEFPRDLLSLKRAQVLCFYMGLPGLSLSLIQQILPHNEGENYIYGMLAFPLLELGRMEEAEEAAKRGFEINKQDCWSQHALCHVLQYKCCFREAVKFMEECSSSWGSSSSFMLTHNWWHVALCYLEGNAPRQRVLEIYDNYIWKELERNDSMSADVYLNAAALLLQLYVRGELDIVGDRLKILSECLTNQENWYMEWHFDVLIVWTLAKTGEISKAEDLLKGLKNRLLRMTKKKQQRMQRGMMLAEALYAYGRDDDNRGLELLDPNFDATDYKIIGASDEQVDVFNEVWYNMLLNTGKPLKAIEVLEKQIKKRDGVPYLWRLLERAYKLANKEEEERIANEKATALESRYFN 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00365 469 SUPERFAMILY TPR-like 100 228 IPR011990 GO:0005515
Gma01g00365 469 CDD StaR_like 48 407 IPR033891 -
Gma01g00365 469 Gene3D Tetratricopeptide repeat domain 35 468 IPR011990 GO:0005515
Gma01g00365 469 Coils Coil 446 466 - -
Gma01g00365 469 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Gma01g00365 469 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 38 6 466 IPR033891 -
Gma01g00365 469 Coils Coil 330 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00365 Gma-Chr1 4423074 4428636 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00365 - - gmx:100789977 934.095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00365 01 4423074 4428636 Gma01g00365 01 4423074 4428636 ECH
Gma01g00365 01 4423074 4428636 Gma02g00226 02 2208326 2214542 GST