Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1813 ATGATGGATCGTTTGGATCAGAAGTCAGAACTGTGGTTAGGGGGTTTAAGTTGGTCTTTGCTTAAGTTAGCGTTCAGGTCCATTACATGTTTCCTTTCCCTCTCTTCTTATGCTTTTTCTGACGTTTTGACAATGACAACCAATTCTTCAAATGGAGAGCACCTAACAACAGCAGCAACAACAAAGCCACCTCCCTTGCCATCTCCTTTGCGCTTTTCCAAGTTCTTTCAGTCCAATATGAGAATTTTGGTCACGGGAGGAGCTGGATTCATTGGCTCTCACCTAGTTGACAGATTAATGGAGAATGAAAAAAATGAGGTAATTGTTGCTGATAACTTCTTCACTGGATCCAAGGACAACCTTAGAAAATGGATTGGTCATCCAAGATTTGAGCTAATCCGTCATGATGTCACGGAGCAATTGTTTATCGAGGTTGATCAGATCTACCATCTTGCATGCCCTGCTTCTCCAATTTTCTACAAATACAATCCCGTGAAGACCATAAAGACAAATGTCATTGGAACACTGAACATGCTTGGGCTTGCAAAGCGAGTGGGAGCAAGGATTTTGCTAACATCTACTTCAGAAGTATACGGGGATCCTCTTGTGCATCCACAACCAGAAAGTTATTGGGGCAATGTTAACCCTATTGGAGTTCGGAGTTGCTATGATGAAGGGAAGCGTGTGGCAGAAACTTTGATGTTTGATTATCACAGGCAGCATGGAATAGAAATACGCATCGCCAGAATCTTTAATACATACGGACCACGCATGAATATTGATGATGGGCGTGTTGTCAGCAACTTTATTGCCCAAGCACTTCGTGGTGAACCCCTGACTGTCCAAGTTCCAGGAACTCAAACTCGCAGTTTCTGCTATGTCTCTGACATGGTTGATGGCCTTATCCGTCTCATGGAAGGGGAAAACACTGGTCCAATCAACATTGGGAACCCAGGTGAATTTACTATGACTGAGCTTGCTGAGACGGTGAAGGAGCTGATTAATCCAAGTGTGGAGATAAAGATGGTGGAGAACACTCCTGATGATCCTCGACAGAGAAAACCAGACATAACAAAAGCAAAGGAATTGTTAGGCTGGGAACCAAAGGTCAAGTTGCGGGATGGTCTTCCCCTAATGGAAGAGGATTTCCGTCTGAGGCTTGGGGTTGCCAAAAAGAACTAA 1182 0.4391 MMDRLDQKSELWLGGLSWSLLKLAFRSITCFLSLSSYAFSDVLTMTTNSSNGEHLTTAATTKPPPLPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDRLMENEKNEVIVADNFFTGSKDNLRKWIGHPRFELIRHDVTEQLFIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQVPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMTELAETVKELINPSVEIKMVENTPDDPRQRKPDITKAKELLGWEPKVKLRDGLPLMEEDFRLRLGVAKKN 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1813 393 CDD UGD_SDR_e 80 384 - -
Glsi14g1813 393 Gene3D - 79 386 - -
Glsi14g1813 393 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 75 384 IPR036291 -
Glsi14g1813 393 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 62 388 IPR044516 GO:0042732|GO:0048040|GO:0070403
Glsi14g1813 393 FunFam UDP-glucuronic acid decarboxylase 6 79 388 - -
Glsi14g1813 393 Pfam GDP-mannose 4,6 dehydratase 83 377 IPR016040 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1813 Glsi-ChrGlsi14 18393786 18396835 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1813 1 392 Miscellaneous Gene Families AT1G02000 24.130 4.30e-17 80.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1813 14 18393786 18396835 Glsi04g0225 04 1431334 1435981 CCT
Glsi14g1813 14 18393786 18396835 Glsi14g1813 14 18393786 18396835 ECH