Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1695 ATGTTTTGGAAGCTCGCTTCTCTGTCTGCCTCCTCTCCTGTGGAAGCAATATTAGACAAGGAGAATTTTACTTTGGAAGAGCTTCTGGATGAAGAGGAAATAATCCAAGAATGCAAGGCCTTAAACAGTCGTCTCATTAATTTTCTGAGAGATAGAGTTCAGGTTGAACAATTACTACACTACATTGTTGAAGAACCACCAGAAGATGCTGAAAGCAAACGTGTCTTCAAGTTTCCATTCATTGCTTGTGAGATTTTTACATGTGAAATTGATGTCATTTTGAAGACCTTGGTGGAGGAAGAAGAGCTGATGAACTTACTATTCTCTTTCTTGGAGCCTAACCGTTCTCATAGTACCTTGTTGGCCGGGTACTTTAGCAAGGTTGTTGTTTGCCTCATGATTCGGAAGACTGTGCCACTTATGAATTATGTTCAAGTCCATCAAAATGTTATTTGCCAACTAGTTGATTTGATAGGAATTACATCCATTATGGAGGTTTTGGTTCGATTAGTAGGTGCTGATGACCATGTGTACCCCAACTTTATAGACGTGATACAATGGTTGGTTGAGAGCAACCTGTTGGAGATGATTGTTGATAAATTAAGTCCATCTAGTACTCCTGAAGTTCATGCCAATGTAGCCGAAACATTGTGTACAATAACTCGAAATGCCTCATCTGCTCTAGCAATTAAACTTTCAAGCCCAAGTTTTGTTGCAAGAATTTTGGGCCATGCATTGGAAGATTCACAATCAAAGTCTAGTCTTATTCACTCTCTTTCAGTGTGTATTTCTTTGTTGGATCCAAAAAGATCAGCAGGCTCTTCTGCCCTTTTTCATTCTTTCCAAAGTCAACACATGTATGAGGTCTCAGTTCCCGTTAACCCAGAGACTATTGATGCAATGCTTCAAAAACTCGGTGACTTGCTTGTGCTTTTGCATGTGTCATCCGACGAAAAGGTATTGCCTACAACATATGGAGAATTGAGGCCTCCACTTGGGAAGCATCGATTAAAGATTGTCGAGTTTATTGCAGTACTTTTGAAAACTGGAAATGAAATGGCAGAAAATGAATTGATCAACTCAGGAACCATTCGTCGAGTTATTGATCTTTTCTTTGGGTATCCATACAATAACTCATTACACCATCATGTAGAAAGTATCATCCTATCATGTTTGGAGAGCAAAACCGATGCCATTGTTGATCATCTTCTTGGAGAGTGTGATTTAATTGGAAAAATTCTCCAAGCAGAAAAAAACAGTATTCTTTCTGGTGACAGCAACCAGCCAACAGTACCTGCTACTGGAAAAAGGGCACCACGTGTGGGAAACATTGGACATATTACTCGACTTGCTAACAAACTTGTTCATTTGGCTCATAACCGAAGCAGCATACAGGTGTGTCTTCAGGAAAGTAGTGAGTGGAATGAGTGGCAAGCTACAGTTCTGCAGGAGCGTAATGTCGTTGAGAATGTTCACCGTTGGGCTTGTGGACGTCCTACTGCATTACAAGAAAGGATGAGAGATAGTGATGATGATGATCTTCATAGTAGAGACTATGATGTTGCTGCTTTAGCAAATAATTTGAGCCAGGCTTTTAAATATAAAATTTATGGGAATGAGGATAATGAAGAGGACCATGGAGGTCTTGATCGAGATGATGAGGATGTCTACTTTGATGATGACTCTGCTGAAGTAGTCATATCATCTCTGAGACTTGGCGATGATCAAGGAAGTAGTCTTTTTACAAACTCCAACTGGTTTGCATTCCAAGATGACAGAATTGGTAATGCACCTGGGGGCACATCATCATCTGAGATGATGGATGAGATTAACTTGAATGGAGCTGCGAATGGTGGCAATAACAGCAGTGATGATGAGGTAGTGGTAGGAGAGGATGAAGAATTGGCTGAGAGCAAAAATATTGTGAATGGCACGTCTAGCTTGAGCACAGACTTCTTCAATGAATTAACTGGTAGCAATTCCATGAATGGTGGCACGTTGAACTTGGAAAGTGAGAAGGCAAGTGCTGCACATGATATGGGATTCTTCAGGTTTGAGGCGCCAGACAACGAGGACTTGTTTGGGGATAGGCCAATACCTGATTGGGTGGGATGGGCTGAACCATCAGATATGCAAGTTACTGGTTCAAGCACGAATCCATTTGTAGATCATGATGAGTCTGATAGCAATCTATCCACTAAACCTCAATTAAGCAGCCCTAACTCTAGTTCTACGAGTGGGGAATCTGCACCTTCAAATGGGTCACCAACTACTAGAGATTCAAGTGAGCGGAGTGGGGATTTGAATCAAAGATCAGTGGCTGTTCCCTCGCTATTTGAAGAGGATGTTGAATTTGTAGGTGTGGAATTAGAAGGTACTGAAAAGGCTATGGAACAGGCTCTCAAAGAAGGGATAGTTGGGGAAGCAGGACCATTGAAAAGGAATGTAGTCCCAAAAGTGCCAGAAAAGGAGAATTCCGAGGAGGGCGGACCTGGAATGAAGGAATTCAATGATGCAAATTACTGGAGGGTTGACCAAGAGGTTGCCGTTCTGGAGTGA 2559 0.4162 MFWKLASLSASSPVEAILDKENFTLEELLDEEEIIQECKALNSRLINFLRDRVQVEQLLHYIVEEPPEDAESKRVFKFPFIACEIFTCEIDVILKTLVEEEELMNLLFSFLEPNRSHSTLLAGYFSKVVVCLMIRKTVPLMNYVQVHQNVICQLVDLIGITSIMEVLVRLVGADDHVYPNFIDVIQWLVESNLLEMIVDKLSPSSTPEVHANVAETLCTITRNASSALAIKLSSPSFVARILGHALEDSQSKSSLIHSLSVCISLLDPKRSAGSSALFHSFQSQHMYEVSVPVNPETIDAMLQKLGDLLVLLHVSSDEKVLPTTYGELRPPLGKHRLKIVEFIAVLLKTGNEMAENELINSGTIRRVIDLFFGYPYNNSLHHHVESIILSCLESKTDAIVDHLLGECDLIGKILQAEKNSILSGDSNQPTVPATGKRAPRVGNIGHITRLANKLVHLAHNRSSIQVCLQESSEWNEWQATVLQERNVVENVHRWACGRPTALQERMRDSDDDDLHSRDYDVAALANNLSQAFKYKIYGNEDNEEDHGGLDRDDEDVYFDDDSAEVVISSLRLGDDQGSSLFTNSNWFAFQDDRIGNAPGGTSSSEMMDEINLNGAANGGNNSSDDEVVVGEDEELAESKNIVNGTSSLSTDFFNELTGSNSMNGGTLNLESEKASAAHDMGFFRFEAPDNEDLFGDRPIPDWVGWAEPSDMQVTGSSTNPFVDHDESDSNLSTKPQLSSPNSSSTSGESAPSNGSPTTRDSSERSGDLNQRSVAVPSLFEEDVEFVGVELEGTEKAMEQALKEGIVGEAGPLKRNVVPKVPEKENSEEGGPGMKEFNDANYWRVDQEVAVLE 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1695 852 MobiDBLite consensus disorder prediction 816 839 - -
Glsi14g1695 852 Pfam SIT4 phosphatase-associated protein 357 490 IPR007587 GO:0019903|GO:0043666
Glsi14g1695 852 Pfam SIT4 phosphatase-associated protein 131 357 IPR007587 GO:0019903|GO:0043666
Glsi14g1695 852 MobiDBLite consensus disorder prediction 710 772 - -
Glsi14g1695 852 PANTHER SIT4 YEAST -ASSOCIATING PROTEIN-RELATED 1 815 IPR007587 GO:0019903|GO:0043666
Glsi14g1695 852 MobiDBLite consensus disorder prediction 695 775 - -
Glsi14g1695 852 MobiDBLite consensus disorder prediction 817 831 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1695 Glsi-ChrGlsi14 17339608 17349448 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1695 14 17339608 17349448 Glsi04g0359 04 2273066 2282029 CCT
Glsi14g1695 14 17339608 17349448 Glsi14g1695 14 17339608 17349448 ECH