LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi04g0359	ATGTTTTGGAAGCTCGCATCTCTCTCTGCGTCCTCTCCTGTTGAGGCAATATTGGACAAAGAGAATTTCACTTTAGAAGAGCTTCTGGATGAAGAAGAAATAATTCAAGAATGCAAGGCCTTAAACAGTCGTGTCATTAACTTTCTGAGAGATAGAGCTCAGGTGGAGCAATTACTACGCTACATTATTGAAGAACCGCCAGAACATGCTGAAAGCAAACGGACCTTCAAGTTTCCATTCATTGCCTGTGAGATTTTCACATGTGAAATTGATGTCATTTTGAAGACCTTGGTGGAGGAAGAAGAGCTGATGAACTTACTATTCTCCTTCTTGGAGCCTCACCGTTCTCATAGTGCCTTGTTAGCTGGTTATTTTAGCAAGGTTGTTGTTTGCCTAATGATTCGGAAGACAGTGCCGCTTATGAATTACGTTCAAGCCCATCAAAATGTTTTTGGCCAACTGGTTGATTTGATAGGAATTACATCCATTATGGAGGTTTTGGTTCGATTAGTAGGCGCTGATGATCATGTGTATCCCAATTTTATAGATGTGATGCAATGGTTGGCTGAGAGCAACCTGCTAGAGATGATTGTTGATAAATTAACTCCATCTAGTTCACCTGAAGTTCATGCCAATGTAGCTGAAACATTATGTACAATAACTCGAAATTCATCATCTGCTCTAGCAATTAAACTTTCAAGCCCAAGTTTTGTTGCTAGAATTTTGGGTCATGCGTTGGAAGATTCACAATCAAAGTCTAGTCTTGTTCACTCACTTTCGGTGTGTATTTCTTTGTTGGATCCAAAAAGATCAGCAGTTTCATCTCCCTTTTTTCATTCTTTCCGGAGTCAACATATATATGAGGCTTCAATTCCTGTTAACCGAGAGACTATTGATGCAATGCTCCCAAGACTTGGTGATTTGCTTATGCTTTTGAATGTGTCAACGGATGAAAAGATGTTGCCTACAACATATGGAGAATTGAGGCCTCCCCTTGGGAAGCATCGATTAAAGATTGTGGAGTTTATTGCGGTGCTTTTTGGAACTGGAAATGAAGTGGCAGAAAAGGAATTGGTCAACTCAGGAACCATCCGACGAGTCATTGATCTTTTCTTTGAGTATCCATTTAATAACTCGTTACACCATCATGTAGAAAGTATTATACTATCATGTTTGGAGAGCAAAAGCGATACCATTGTTGATCATCTTCTTCAAGAGTATGATTTAATTGGAAAAATTCTTCAAGCAGATAAACATCCTATTCTTTCGGGTTTCAGCAATCAGCCCTCGGTACCAGCTGCTGGAAAACAAGCACCACGGGCAGGAAACATTGGACATATTACTCGAATTGCTAACAAACTTATTCACCTGGCACATAACCAAAGCCGCATACAAGCATGCATTCAGGAAAATTGTGAGTGGAATCAGTGGCAAGCTACTGTTCTGCAGGAGCGTAACATGGTTGAAAATGTTCATCGTTGGGCTTGCGGACGTCCAACTGCATTACAAGATAGGATCAGGGATAGTGATGAGGATGACCTTCATGACAGAGACTACGACGTTGCAGCTATAGCAAACAATTTGAGCCACACTTATAATTATAACATTTATGGAAATGAGGAAAATGAAGAGGACCATGGAGGTCTTGATCGTGATGCTGAGGATGTCTACTTTGATGATGACTCTGCTGAAGTAGTCATTTCATCCCTAAGACTAGGTGATGATCAACGGAGTAGTCTCTTTACAAACTCCAACTGGTTTGCATTCCAAGATGACAGAGTTGGTAATGCACCTGGAGGAACATCATCCTCTGAGATGATGGATGAGATTAGCTTGAATGGAGCTACAAATGGTGGTAACAATAGTAGTGATGATGAAGTCGTCATTGGAGAGGATGAAGGATTGGCTGAAAGTAAAAGTAATGTAAATGGCACATCTAGCTCGAGCACGGATTTCTTCAATGGATTAGCTGGCATCGATTCCATGAATGTTGGCACTTTGAACTTGGAAAGTGAGAAGGCAAGTGCATCACACGATACAGGGTTCTTCGGGTTTGAGGCAACAGACAATGAGGACTTATTTGGAGATAGGCCACTACCTGAGTGGGTGGGATGGGGTGAACCATCAGATATGCAAGTTGCTGGTTCAAGCATGAATCCCTTTATGGATCATGATGCGTCTGATAAGAATCCCTCCACTAAACCTCAGTTAGGCAGCTCTAGTCCTAGTTCTCCTTCAAATGGGGAGTCTACACATTCAAATGGGTCACCAACAACTAGAGATTGTAGCGAGGGGGCTGGTGATTTGAGTCAAAGATCAGCAGCAGTACCCTCCCTATTTGAAGAGGATGTTGAATTTGTAGGTGTGGAATTAGAAGGTACTGAGAAGGCTATGGAACAGGCTCTCAAAGAAGGAATAGTTGGGGAAGCAGGACCATTGAAAAGAAACAGAGTCCCAAAGGTGCCAGAGAAAGAGAATTCTGAAGAGGGTGGACCTGGAATGAAGGAATTCAATGACGCCAATTACTGGAGGGTTGACCAAGAGGTTGCTGTTCTAGAGTGA	2562	0.4188	MFWKLASLSASSPVEAILDKENFTLEELLDEEEIIQECKALNSRVINFLRDRAQVEQLLRYIIEEPPEHAESKRTFKFPFIACEIFTCEIDVILKTLVEEEELMNLLFSFLEPHRSHSALLAGYFSKVVVCLMIRKTVPLMNYVQAHQNVFGQLVDLIGITSIMEVLVRLVGADDHVYPNFIDVMQWLAESNLLEMIVDKLTPSSSPEVHANVAETLCTITRNSSSALAIKLSSPSFVARILGHALEDSQSKSSLVHSLSVCISLLDPKRSAVSSPFFHSFRSQHIYEASIPVNRETIDAMLPRLGDLLMLLNVSTDEKMLPTTYGELRPPLGKHRLKIVEFIAVLFGTGNEVAEKELVNSGTIRRVIDLFFEYPFNNSLHHHVESIILSCLESKSDTIVDHLLQEYDLIGKILQADKHPILSGFSNQPSVPAAGKQAPRAGNIGHITRIANKLIHLAHNQSRIQACIQENCEWNQWQATVLQERNMVENVHRWACGRPTALQDRIRDSDEDDLHDRDYDVAAIANNLSHTYNYNIYGNEENEEDHGGLDRDAEDVYFDDDSAEVVISSLRLGDDQRSSLFTNSNWFAFQDDRVGNAPGGTSSSEMMDEISLNGATNGGNNSSDDEVVIGEDEGLAESKSNVNGTSSSSTDFFNGLAGIDSMNVGTLNLESEKASASHDTGFFGFEATDNEDLFGDRPLPEWVGWGEPSDMQVAGSSMNPFMDHDASDKNPSTKPQLGSSSPSSPSNGESTHSNGSPTTRDCSEGAGDLSQRSAAVPSLFEEDVEFVGVELEGTEKAMEQALKEGIVGEAGPLKRNRVPKVPEKENSEEGGPGMKEFNDANYWRVDQEVAVLE	853

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi04g0359	853	PANTHER	SIT4 YEAST -ASSOCIATING PROTEIN-RELATED	1	819	IPR007587	GO:0019903\|GO:0043666
	Glsi04g0359	853	MobiDBLite	consensus disorder prediction	701	779	-	-
	Glsi04g0359	853	MobiDBLite	consensus disorder prediction	816	832	-	-
	Glsi04g0359	853	MobiDBLite	consensus disorder prediction	731	766	-	-
	Glsi04g0359	853	Pfam	SIT4 phosphatase-associated protein	131	355	IPR007587	GO:0019903\|GO:0043666
	Glsi04g0359	853	Pfam	SIT4 phosphatase-associated protein	357	491	IPR007587	GO:0019903\|GO:0043666
	Glsi04g0359	853	MobiDBLite	consensus disorder prediction	813	841	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi04g0359	Glsi-ChrGlsi04	2273066	2282029	Dispersed/Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Glsi14g1695	14	17339608	17349448	Glsi04g0359	04	2273066	2282029	CCT