Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1654 ATGTCATCATCCCTTTCCTCTTTCCTCCTTATGCATCCTCTTTTCTCTCTTGTTATATTCTCTCTCCTGATTTCTTCATGCAGTGGTCAGCGTCCACCCTCACCTGGCTACTGCCCAAGTTCCAGAATTAGTCCTGTCAGCTTTGATCAAGGGTTTAGAAACCTCTGGGGAAGTAAGCATCAGAGATTAGATCAGGGCTCATTGACAATCTGGCTCGACTCCATATCAGGGAGTGGATTTAAGTCACTACACTCTTACCGATCTGGGTACTTCGGTGCTGCAATTAAGCTTCAACCCGGTTATACTGCAGGAGTCATCACATCTTTCTACCTTTCAAACAACCAAGACCACCCAGGAAACCATGATGAAATTGACATTGAGTTCCTTGGTACTACACCAGACAAGCCATATGTCTTGCAGACAAATGTATACATCAGAGGAAGTGGAGATAGGAAAAATGTTATAGGGAGAGAAATGAAGTTCCATCTTTGGTTCGATCCAACACAAGATTTTCACAATTATGCTATTCTATGGAAACCCAGTGAGATAATATTTCTAGCGGATGATGTCCCCGTAAGAAGGTATCCTAGGAAGAGTGAAGCTACATACCCTACGAGACCGATGTATGTGTACGGATCAATATGGGATGCATCGTCCTGGGCTACAGAAGATGGAAAATACAAAGCTGATTATAGATACCAGCCCTTCATTGGAAGGTACAAAATGTTCAAACTGCAGGGTTGCACCACCGAAGGCCCAGCCTCTTGCCAACCACCCTCCGCCTCACCATCTGGCTATGGCAGTCTGAGCCCTCAGCAACAGGCAGCCATGCAATGGGTGCACGACAACTACTTGGTTTATAACTATTGCCTTGACCCTAGAAGAGACCATACTCTTACTCCAGAGTGCTAG 912 0.4529 MSSSLSSFLLMHPLFSLVIFSLLISSCSGQRPPSPGYCPSSRISPVSFDQGFRNLWGSKHQRLDQGSLTIWLDSISGSGFKSLHSYRSGYFGAAIKLQPGYTAGVITSFYLSNNQDHPGNHDEIDIEFLGTTPDKPYVLQTNVYIRGSGDRKNVIGREMKFHLWFDPTQDFHNYAILWKPSEIIFLADDVPVRRYPRKSEATYPTRPMYVYGSIWDASSWATEDGKYKADYRYQPFIGRYKMFKLQGCTTEGPASCQPPSASPSGYGSLSPQQQAAMQWVHDNYLVYNYCLDPRRDHTLTPEC 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1654 303 Pfam Glycosyl hydrolases family 16 49 232 IPR000757 GO:0004553|GO:0005975
Glsi14g1654 303 Gene3D - 28 303 - -
Glsi14g1654 303 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 39 240 IPR000757 GO:0004553|GO:0005975
Glsi14g1654 303 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 266 303 IPR010713 GO:0005618|GO:0016762|GO:0044042|GO:0048046
Glsi14g1654 303 SUPERFAMILY Concanavalin A-like lectins/glucanases 47 303 IPR013320 -
Glsi14g1654 303 PIRSF EndGlu_transf 9 303 IPR016455 GO:0010411|GO:0016762|GO:0042546
Glsi14g1654 303 FunFam Xyloglucan endotransglucosylase/hydrolase 36 303 - -
Glsi14g1654 303 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 47 303 IPR044791 GO:0004553
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1654 Glsi-ChrGlsi14 16930073 16931471 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1654 15 303 Glycoside Hydrolase AT3G44990 67.808 1.71e-143 404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1654 14 16930073 16931471 Glsi04g0417 04 2725142 2726862 CCT
Glsi14g1654 14 16930073 16931471 Glsi14g1654 14 16930073 16931471 ECH