Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1573 ATGCCACAGCCATTTGAGACACAAACCATTAAGGAGTTGACAAAGTTGCAGGGGACTGCAAAACGTTACTATTTGCAGATATGGGTAGCTAGGTTTGGCTCAACAAACAGTGCAGAGACCTCAGTTGAATACAATGGCATAGTCATCTTGGAAAGTATTCTCCACTTCCTTCAGGACCGGACCATTTTAGTCACGGGTGCCACTGGATTTCTCGCCAAAATTTTTGTCGAGAAGGTACTGAGGGTTCAACCAAATGTAAAAAAACTCTATCTTCTCTTAAGAGCCGCAGATACCAGCTCTGCCACCCTACGCTTGCAAAATGAGATCATAGGGAAGGAATTGTTTAGATTGTTGAAGGACAATCAAGGTGCAGATTTCAATTCCTTTGTCTCGAAAAAGTTGACTATGGTGCCTGGGGATATTTCTTGTGAGGACTTGAATTTGAAGGACTCCATTCTAAGGGAAGAGATTTGCAAACAAACAGATGTTATAGTTAATTTAGCTGCAACAACTAACTTTGATGAAAGATACGATGTTGCATTGGGTATAAATACCTTAGGAGCTAAGCATGTCTTGAGGTTCGCCCAAAAATGTATTAAATTGAAAGTACTTGTTCACGTATCAACAGCTTACGTATGCGGCGAGAAAGGAGGACTCATAGCAGAGGATCCATATCAAATGGGTGTGTCACTAAATGGAGTGCCTGGGCTAGACATTAATGCAGAAAAGAAAGTGATAGAAGAAATTTTGAATCAGCTACGAGAGGAGGGAGCCACAGAAGATGAAATTAAAGTTTCCATGAAGGACTTGGGTATTAAAAGGGCAAACGTATATGGATGGCCAAACACATACGTGTTTACAAAGGCAATGGGGGAAATGCTTGTGGGAAATCTAAAGGGAAACCTGCCCGTTGTTATTGTACGTCCTACCATCGTTACCAGCACTTACAAAGAACCTTTCCCTGGTTGGGTTGAAGGTGTAAGAACCATAGACAGTTTGATTGTTGCTTATGGTAAAGGAAAATTAACATGCATCCCTGCGGATATTATGGCAGTTTTTGACGCGATACCAGCTGACATGGTGGTGAATGCAATGTTAGTGGCCATGGTGGCTCATGCTAACCAGCCTGATGATATCATCTACCATGTGGGTTCCTCACTAAGAAATCCCATCAGATACGTTAATCTTCGAGACTACAGCTCAAAATACTTCACATCAAGGCCATGGATAAACAAGGATGGAAAGCCTGTTAAGGTTGGCAAAATTACAGTATTGAACAGCATGGATAGTTTCCGCAGATATTTGTTCATTCGCTACCTGCTTCTCTTGAAGGGACTAGAGCTGGCTAATACAGCCTTTTGCCAGTATTTTCGGGGAGTGTATCTTGACCTTAACAGGAAGATTCAGATTGTGATGCGATTGGTTGATCTTTACAAGCCTTACTTGTTCTTCAATGGCATATTTGATAATATGAATACGGAGAAGTTGCGGACAGCAGCAAGACATGGTGGGGTAGAGATGGATATGTTTTACTTTGACCCCAAGATGATTGATTGGGAGGATTACTTCATTAATATCCATATCCCTGGCATTGTCAAGTATGTCCTCAAGGGATGA 1617 0.4168 MPQPFETQTIKELTKLQGTAKRYYLQIWVARFGSTNSAETSVEYNGIVILESILHFLQDRTILVTGATGFLAKIFVEKVLRVQPNVKKLYLLLRAADTSSATLRLQNEIIGKELFRLLKDNQGADFNSFVSKKLTMVPGDISCEDLNLKDSILREEICKQTDVIVNLAATTNFDERYDVALGINTLGAKHVLRFAQKCIKLKVLVHVSTAYVCGEKGGLIAEDPYQMGVSLNGVPGLDINAEKKVIEEILNQLREEGATEDEIKVSMKDLGIKRANVYGWPNTYVFTKAMGEMLVGNLKGNLPVVIVRPTIVTSTYKEPFPGWVEGVRTIDSLIVAYGKGKLTCIPADIMAVFDAIPADMVVNAMLVAMVAHANQPDDIIYHVGSSLRNPIRYVNLRDYSSKYFTSRPWINKDGKPVKVGKITVLNSMDSFRRYLFIRYLLLLKGLELANTAFCQYFRGVYLDLNRKIQIVMRLVDLYKPYLFFNGIFDNMNTEKLRTAARHGGVEMDMFYFDPKMIDWEDYFINIHIPGIVKYVLKG 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1573 538 CDD FAR-N_SDR_e 60 408 - -
Glsi14g1573 538 CDD FAR_C 461 536 IPR033640 -
Glsi14g1573 538 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 52 382 IPR036291 -
Glsi14g1573 538 Pfam Male sterility protein 64 365 IPR013120 -
Glsi14g1573 538 Pfam Male sterility protein 439 537 IPR033640 -
Glsi14g1573 538 PANTHER MALE STERILITY PROTEIN 2-RELATED 53 537 IPR026055 GO:0080019
Glsi14g1573 538 Gene3D - 55 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1573 Glsi-ChrGlsi14 16169900 16173811 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1573 160 536 Acyl Lipid Metabolism Gene Families AT4G33790 62.865 1.42e-180 511
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1573 14 16169900 16173811 Glsi04g0478 04 3222795 3240113 CCT
Glsi14g1573 14 16169900 16173811 Glsi14g1573 14 16169900 16173811 ECH