Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0478 ATGGAGTTGGGAAGTATACTCCACTTCCTTCAGGATAAGACCATTTTAGTCACTGGTGCTACTGGATTTCTTGCCAAAATTTTGGTGGAGAAAATATTGAGGGTTCAACCAAACGTGAAGAAACTATATCTTCTTTTAAGAGCCGCAGACGCCAAATCTGCCACCCATCGCTTGCAAAATGAGATCATAGGGAAGGACTTGTTTAGAGTGCTGAAGGATAAATTGGGTTCAAATTTTAATGCCTTTGTTTCGGAAAAGTTGACTCTGGTGCCTGGGGACGTAAGTCGTGAGGACTTGGGTTTGAAGGATTCCATTTTAAGGGAAGAGATTTGCAATCAAACAGATGTTATAGTCAACTTGGCTGCAACTACTAACTTTGAAGAAAGATATGATGTTTCTTTAGGACTAAATACCTTCGGAGTTAAGCATGTCATAAGCTTCGCCAAACAATGTGTTAAACTCAAGGTGCTTGTCCACACATCAACAGCTTATGTATCTGGTGAGAGAGAAGGGCTCATATCAGAGAACCCATATCACTTGGGTGATTCGCTTAATGGAGTGCCAGGACTAGACATTGATACAGAAATCAAAGTGATACAAGACAAATTGAGGGACCTTCGAGAGGAGGGAGCCACAGCGGATGAAATTAAATTGGCCATGAAGGACTTAGGTGTTAACAGGGCAAAGGTGTATGGATGGCCAAACACATATGTATTTACCAAGGCAATGGGAGAAATGCTTCTGGAAGATCTCAAAGGAAACTTGCCTGTTGTTATTTTACGTCCTGCCATAGTTACGAGTACATTCAAAGAACCTTTCCCTGGTTGGGCAGAAGGTGTAAGAACCATTGACAGTTTAGCTGTTGCTTATGGGAAAGGAAAATTAACATGCTTTCTTGGAGATCTTCAGGCATGTGTTGATGTGATACCAGCTGATATGGTGGTGAATGCAATACTAGTGGCCATGGTGGCTCATGCAAATCAGCCTAATAATGATATCATATATCATGTGGGTTCCTCTGTTAGAAATCCTGTCAGATACCAAAATCTTCAGGACTACGGCTTAAAATACTTCACAGAAAAACCATGGATAAACAAGGACGGAAAGCCCGTCAAGGTTGGCAAAGTTACAGTGTTGAGCGACATGGCTAGTTTCCGCAGATATATGTTCATTCGCTACCTGCTTCCGTTAAAGGGACTAGAGCTGGCCAATACAGCCTTTTGCCAGTACTTTCAAGAAACGTATCTTGAACTTAACAGGAAAGTCCAGACTGTGATGCGGTTGATTGACCTTTACAGGCCTTATTTGTTCTTCAATGGAGTATTTGATGATATAAACACAGAGAAGTTGCGAATGGCTGCAAGACAAAGTTGGGTAGAGACAGATTTGTTTTACTTTGACCCCAAACTGATCGATTGGGACGACTATTTTCTGAACATCCATATTCCTGGTATCGTTAATCTTGGACTAGTTTTCCATAAAGTGCACAGTCCTATTTTTCTGGAGAAGATGCTCAGAGTTCAACCAGATATAAAGAAATTGTATCTTCTTCTCAGAGCTTCAAATGCTGAATTAGCCTGTCAGCGCTTATTCGATATCGCATTACGTACCAATACATTGGGAGCTCTTCAGCCTAGGGGGACCATATCAGAGGAAGCATTTTGCACGGGTCAAACCATAAAAGAGTCCTCAAAATTAGACATTGAGTTAGAAGAGAAGTTGATGGAGGAAAAATTGCATGAACTCCAAGTTCAGAATGCTGATGAAGAAACAATTACGTCAACCATGAAAAATTTTGGAACTGAAAGTAAGGATGGAGAAGTAATACAAGAAGAACCCTTTAATATAGGTCAAACCTTGATAGGGACATCAAAATTAGACATTGATGCAGAAATTAATCATGTGAAGAAAAGAATTGATGAACTCAAAGCAGAGAATGCCAGTGGAAAGGCCACGTCTGCAATGAAATATTATGGAATTAAGAGAACAATGGATGCTGTAAGTGTTGGCTATGGTGAAGGAAAAGTAACATGCTTTCCGGGTCCTTTTGAGACAATTTTAGATGTGGTAAGTTTAGTCAAGTTTGTCGTTATTTTGCTTCCTGATACTTGA 2112 0.4034 MELGSILHFLQDKTILVTGATGFLAKILVEKILRVQPNVKKLYLLLRAADAKSATHRLQNEIIGKDLFRVLKDKLGSNFNAFVSEKLTLVPGDVSREDLGLKDSILREEICNQTDVIVNLAATTNFEERYDVSLGLNTFGVKHVISFAKQCVKLKVLVHTSTAYVSGEREGLISENPYHLGDSLNGVPGLDIDTEIKVIQDKLRDLREEGATADEIKLAMKDLGVNRAKVYGWPNTYVFTKAMGEMLLEDLKGNLPVVILRPAIVTSTFKEPFPGWAEGVRTIDSLAVAYGKGKLTCFLGDLQACVDVIPADMVVNAILVAMVAHANQPNNDIIYHVGSSVRNPVRYQNLQDYGLKYFTEKPWINKDGKPVKVGKVTVLSDMASFRRYMFIRYLLPLKGLELANTAFCQYFQETYLELNRKVQTVMRLIDLYRPYLFFNGVFDDINTEKLRMAARQSWVETDLFYFDPKLIDWDDYFLNIHIPGIVNLGLVFHKVHSPIFLEKMLRVQPDIKKLYLLLRASNAELACQRLFDIALRTNTLGALQPRGTISEEAFCTGQTIKESSKLDIELEEKLMEEKLHELQVQNADEETITSTMKNFGTESKDGEVIQEEPFNIGQTLIGTSKLDIDAEINHVKKRIDELKAENASGKATSAMKYYGIKRTMDAVSVGYGEGKVTCFPGPFETILDVVSLVKFVVILLPDT 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0478 703 CDD FAR_C 391 485 IPR033640 -
Glsi04g0478 703 Gene3D - 8 374 - -
Glsi04g0478 703 Coils Coil 625 652 - -
Glsi04g0478 703 Pfam Male sterility protein 17 318 IPR013120 -
Glsi04g0478 703 Pfam Male sterility protein 392 486 IPR033640 -
Glsi04g0478 703 CDD FAR-N_SDR_e 13 362 - -
Glsi04g0478 703 PANTHER MALE STERILITY PROTEIN 2-RELATED 6 487 IPR026055 GO:0080019
Glsi04g0478 703 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 338 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0478 Glsi-ChrGlsi04 3222795 3240113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0478 531 690 Acyl Lipid Metabolism Gene Families AT4G33790 29.255 7.09e-13 68.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1573 14 16169900 16173811 Glsi04g0478 04 3222795 3240113 CCT