Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1547 ATGACCGAGGTCCTCCACTCTCCTTCCCATTTTTCTTCCTCGTCAAGGAGAAGCTCTTCCTCTTCTTCTTCCCTATCCTGTGCGCCCCTATCTTCATTGTCTTGCACAGGTCCTCCCAGTGATGGCATTCTCCTTATTAGCGACCAAGAACCTTCGTCACCTTCTTCTGTAGCCGTGGACGATTGTTCAACGGCTACAAACTGTGATATCACGGAGCTGAAGGACAGGGACAAGCACCGGACTGAACAGCTTTCTGTTTTGGCGCTTATTGTGACCCTTTTCAGGAAGTCCTTGATTACTTGTAAGAGTGACAGGAGGGAGCTGTGCGCGATGGAGATCGGATGGCCGTCTAATGTGCGCCATGTTGCACATGTCACGTTTGATAGGTTCAATGGTTTTTTGGGTTTGCCTGTTGAGTTGGAACCTGAAGTACCCAGAAGGCCTCCCAGTGCTAGTGCAACTGTTTTTGGAGTTTCAACGGAATCCATGCAGTTATCATATGACGCAAGAGGGAACAGTGTGCCAACAATTCTGTTACTAATGCAAAGACGCTTATATACCCAAGGAGGGTTGCAGGCAGAGGGCATTTTCAGAATTAACGCAGATAATAGTCAAGAGGAATATGTTAGGAACCAATTGAATAGCGGAGTGGTTCCAGAAGGCGTTGATGTACATTGTTTGGCAGGACTTATCAAGGCTTGGTTTAGGGAGCTGCCTACAGGTGTTCTGGATTCTTTATCGCCTGAGCAGGTAATGCAATGCCAGACTGAGGAGGAGTGTGCTGAACTGGCGAGGCATTTACCTCATACTGAAGCTGCCCTCTTGGACTGGGCCATCAATCTGATGGCTGATGTTGTCCAACATGAAAATCTGAACAAGATGAATGCACGCAACATTGCCATGGTTTTCGCACCAAACATGACTCAGATGGCAGATCCTTTGACTGCATTAATGTATGCAGTTCAAGTGATGAACTTCTTGAAGACACTTATATTAAGGACCCTCAGCGAAAGAAAGGTTTCTGTGCTAGAGTCTTCTCCTCGATTTTATTTAGAGCCTTCAGATGAGAATGGGCACCATAGCCCTTTGCAGTCCTGCCAGCAAGATACTGCTGAAGAAAATGATGAGGCTCAGGAAAACTTCGTTCCTGAGAAAACTGTCTTAGAATGTTCCCCTGACTTCCTCCAAAACAATAACTTAACTAGAGGAGAATCTGGCAGTTTGTTAACCTCTTCTGAGCATCTAGTTTGTGATGGGGATTTATATTGTGAATTTCCACCCAAAGGAAACGCTGTGAATAGTAAGACTGGCCAATCAAGTAATTCGAATTCTAGAAAGGGGCCGAAAAAAACCAGAGCCCAGCAACCCACTAATTTCGGAACAGTTCCTGTTGAGAAGAAGGGGATTAGCAACCTGAGTCGCATAGAAACAAGATCAGAGAGGATAGAAGCCTGGCGGTGA 1461 0.46 MTEVLHSPSHFSSSSRRSSSSSSSLSCAPLSSLSCTGPPSDGILLISDQEPSSPSSVAVDDCSTATNCDITELKDRDKHRTEQLSVLALIVTLFRKSLITCKSDRRELCAMEIGWPSNVRHVAHVTFDRFNGFLGLPVELEPEVPRRPPSASATVFGVSTESMQLSYDARGNSVPTILLLMQRRLYTQGGLQAEGIFRINADNSQEEYVRNQLNSGVVPEGVDVHCLAGLIKAWFRELPTGVLDSLSPEQVMQCQTEEECAELARHLPHTEAALLDWAINLMADVVQHENLNKMNARNIAMVFAPNMTQMADPLTALMYAVQVMNFLKTLILRTLSERKVSVLESSPRFYLEPSDENGHHSPLQSCQQDTAEENDEAQENFVPEKTVLECSPDFLQNNNLTRGESGSLLTSSEHLVCDGDLYCEFPPKGNAVNSKTGQSSNSNSRKGPKKTRAQQPTNFGTVPVEKKGISNLSRIETRSERIEAWR 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1547 486 ProSiteProfiles Rho GTPase-activating proteins domain profile. 158 339 IPR000198 GO:0007165
Glsi14g1547 486 SMART PBD_5 113 147 IPR000095 -
Glsi14g1547 486 FunFam Rho GTPase-activating protein 5 143 336 - -
Glsi14g1547 486 SMART RhoGAP_3 172 335 IPR000198 GO:0007165
Glsi14g1547 486 MobiDBLite consensus disorder prediction 1 34 - -
Glsi14g1547 486 CDD RhoGAP 175 331 - -
Glsi14g1547 486 ProSiteProfiles CRIB domain profile. 113 126 IPR000095 -
Glsi14g1547 486 PANTHER MKIAA1688 PROTEIN 1 452 IPR044785 GO:0005096
Glsi14g1547 486 MobiDBLite consensus disorder prediction 431 464 - -
Glsi14g1547 486 Gene3D CRIB domain 109 142 IPR036936 -
Glsi14g1547 486 CDD CRIB 111 151 - -
Glsi14g1547 486 Pfam P21-Rho-binding domain 112 140 IPR000095 -
Glsi14g1547 486 MobiDBLite consensus disorder prediction 431 461 - -
Glsi14g1547 486 Gene3D Rho GTPase activation protein 146 344 IPR008936 -
Glsi14g1547 486 Pfam RhoGAP domain 175 309 IPR000198 GO:0007165
Glsi14g1547 486 SUPERFAMILY GTPase activation domain, GAP 153 332 IPR008936 -
Glsi14g1547 486 MobiDBLite consensus disorder prediction 351 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1547 Glsi-ChrGlsi14 15863731 15868086 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1547 14 15863731 15868086 Glsi04g0508 04 3459851 3467035 CCT